Detail



ID : Ahg944838

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944838|scaffold_701067.1
Sequence
TTGCATCCAT TTAAAAAGTT CATGGATAGG TGGTCGGGTA AAAGAGCCCA TGAGGCGCGA CCTGACTCTA AGAAGGCTGG TGGTGTTGTT TTCAGAGATA GATTTAACAA CAATAGTTGC AAGGTTCCTA TTTGTAGTGA TGAGAAAAAA ACGATGAACT TTACTCGGTT TGTTGGCTCT TCAGATAAGA AAGAGAAGTC AGTCTTGTCT ACATACCGCT CTTCGCCAAA CGGGAAGGAA GTAATTGGAA CTTCCTCGAA GATTTGTGGC TCTAGCTCCT CTTCTGTGAA AAGTGAGAAG CAACCGTTTT CTCAGATTGC CATGGATTCA TCAGAGAGCA GCAGAGGTAG CGAAGATGAG GTAGAGACAG AAATCTTGCA AGTTTCTCTT GGAAGAGATA AAAGAAAAGC TAACAATAAA CTTATTTATG GAAAAGTTAT AACACCAGAA GCGGAATGCT CAAACTTGCC ATCGAGCTCA AGAATCAAGA GAGGTTTTAG GCAGAGGTTT GGGTTGAGCA AGCAAGAGTT TCACCCTGGT CCCTCTGGCC AGTCAACATC TGCCAACCGA GGATGCAGCC CGTTGTTATC CGGTGTCATT CCAAGTGGTT TTGGATTGGA GAAAAGATTA AGTCGGAAGG CAGATACAAT CAATAAGAGG AAAGTTTATG GAGAAAGCAG TTCTAGCACC TCAGCTAGGG GGAAGAATGT AACAGAAACA CCAGCTGAAG TTAGACGTCG CAGTTTTAAT CCGAGAGGTT CTGTTTCAGA TAGTAGACAG GCTAGACACT GCATTTTGAA TGATGACAAC GATGTTGCTT CATTTGGGAG TCAGAGATTG GCAGATAGAA GTAATAGTCG CATTAGATTC TCAAACCCTG GGAGTGGTAG AGAAGCTTTA TCCTCTGTCA CGGCAACAGA GATGTCTCCG ACTGAAACAT CAAACAATCT CAATTCTCCT GTCTCTTTGG AGCTGTTCTC TGGTTTTCCA GAATTTGGCC CCCCTGGTTC CTTATTGAGT CAAGACAGTT TTCGCAGTTA CAATTTAGAT GGGATCTCGG AGATTTTGCC AGAGCTTGAT AGGATTGAAC AAGATATCGA GCTTAATTAT GAGGAGCTGC TTATCATGGA GACAGGTTTA CTTCTCGGTG GACTAAGCTT CCATGACCAA CACCGAGACA TGAGGCTAGA CATCGATAAC ATGTCATATG AGGAACTATT AGCTCTTGAA GAGAGGATTG GTACAGTAAG CACTGCTCTC ACAGAAGAAG CAATATCAAA GTGCTTGAAA ACAAGCATCT ATCAGATGAA ACCTTTAACT TATGGGTCTA TCACCAAAAG TCCTAGTGAT CACAAGGAAG ATGCCAAATG CAGCATCTGC CAGGAAGAGT ATACAATAGG AGATGAAGTT GGGAGGCTAC ACTGTGAGCA CACATACCAT GTGAAGTGTG TGCAAGAGTG GTTGCGGATG AAGAGTTGGT GCCCAATCTG CAAAGCCACT GCGGAAACCT CATCTAAATA ACTGTCTTCT TCTTCTTCCT CGTT 
Length1544
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4066073.. 4068187
Download Sequence
A.thaliana
AGI-codeAT4G31450.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.43398 Ahg332819 Arabinanase/levansucrase/invertase
11.0905 Ahg476021 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.2665 Ahg477678
33.121 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
39.9875 Ahg492573 non-yellowing 1
41.5692 Ahg496280 glucuronidase 1
52 Ahg482001 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
53.3854 Ahg907209 transcription factor jumonji (jmjC) domain-containing protein
58.4808 Ahg927161 ARM repeat superfamily protein
65.192 Ahg912113 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression