Detail



ID : Ahg945162

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945162|scaffold_701391.1
Sequence
TCTCACACAG ACAACACAGA GATGGCTTGT GTTCGGTCGA TTGGTTCTCT AACTTCTGTC ACTCATTCTC CACGAAATGT TCCTCGCTCA GGCATTGTCT TATCTTCATG CTCTCTTCTT CCCATCAAAG GCTCCTCTTT CACTGGCTCC CCTGTTTCTC TCCCGCGGGC TCAACCCTCA TCCCGAACAG CTCTGAGACC GAGGAAACCC GTCTCTATCA CGATGATGGT AAAACCGACG CTCCAATTCA TTCAAGGGAC GGATGAGATG ACCATCCCTG ATGTTAAGCT GACTCGGTCA AGAGACGGAT CTAACGGAAT GGCACTCTTC TCTTTTGATC AGCCATCGGT TTTCGACTCG AGCGGTGAAG TCGGGGAGAT TACAGGATTG TACATGATCG ATGAGGAAGG TGTGATTCAG TCGACGGATG TAAACGCGAG ATTCGTGAAT GGGAAACCGG AAGGGATTGT GGCGAAACAC ATTATGCGAA GTCCGAAAGA ATGGGACAGG TTCATGAGGT TTATGGAGCG ATACTCAGAC CAGAATGGCT TGCAGTTTGT TAAGAAGCAA TGAGGTGGGA GACACAATAA GCA 
Length593
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5302809.. 5303765
Download Sequence
A.thaliana
AGI-codeAT4G28660.2
Descriptionphotosystem II reaction center PSB28 protein
TAIR curator summarySimilar to PsbW subunit of photosystem II.
Alias[PSB28][photosystem II reaction center PSB28 protein]
Gene coexpression
MR
MR Locus Description
9.64365 Ahg484368 Thioredoxin superfamily protein
12 Ahg482448 DnaJ/Hsp40 cysteine-rich domain superfamily protein
13.1909 Ahg482510 shikimate kinase like 2
15.2315 Ahg474606 chaperonin 60 beta
16 Ahg492365 31-kDa RNA binding protein
16.0935 Ahg934425 NAD(P)-binding Rossmann-fold superfamily protein
16.7929 Ahg484572 ribosomal protein L12-A
23.7487 Ahg480184 proton gradient regulation 5
23.7697 Ahg928878 Thioredoxin superfamily protein
24.3105 Ahg474964 monodehydroascorbate reductase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression