Detail



ID : Ahg482510

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482510|fgenesh2_kg.4__1570__AT2G35500.1
Sequence
ATCATCCATG GCTGCTTTTG CTTCTGGTTT GGCTTCTACA ATCTTCTACT CTCCTTCCCT AAACCCTCTC ACCTGTCAAG CAACTCTTTT TTCTCCGATT CGGATTCGTT CCTCGCCTCG CGTTTTCAGG GGATTACATA GCCTCCGACG CCGCGGCTTT CGGCGATTCT CTCAGAATGT TACCGCCGAT CGGTTCAATA GCTTCTCGTG TAACTGCTTA TCCGCCGTAT CCACCAGCAC TATCGATTAC GAGTTCACGG ATGGTGGCAA AGAGGTGGAA TTAAGATTGA GGTTGAAGAC AGGTGACACA CTTTCTCCAA AGGATATATC TGTTGATGCA GATGGAACAT CGTTAGCCGT TAAAGAAAAG CGTAATGGAT TGCTGATTAC ACTTCTAGAG ACTAACCAGT TATTTGAGAA GATTATGCCC TCTGAAACAA TATGGTACAT AGACGAAGAT CAGTTGGTTG TCAACATGAA GAAGGTGGAT GGGGAATTGA AGTGGCCTGA TATTGTTGAG TCCTGGGAAT CTTTGACTGC GGGAATGTTG CAACTTCTTA AAGGTGCATC AATCTACATT GTGGGAGATT CAACTGAAAT CAACCAAAAA GTGTCTCGGG AGCTAGCCGT TGGCCTTGGG TACAGTCCTT TAGATTCAAA GGAATTGCTG GAAAGCTTTT CCAAGCAAAC AATCGATTCT TGGATTCTTG CAGAAGGGCC GGATTCTGTA GCTGAAGCAG AGAGTTCGGT GTTGGAAAGC TTGAGCAGCC ATGTGCGTAC TGTTGTCTCA ACTTTGGGAG GTAAACATGG AGCTGCAGGG AGAGCCGATC AGTGGAGACA TCTTTACTCC GGATTTACCG TTTGGGTATC ACAGACTGAA GCGACAGATG AAGAATCAGC TAAAGAAGAA GCGAGGCGAA ACAAGCAAGA GAGGGAGATT GGGTATTCAA ACGCAGACGT GGTGGTGAAG CTCCAAGGTT GGGACCCGAC GCATGCTAAG AGCGTGGCTC AGGCTTCATT GAGTGCACTT AAGCAACTGA TCATCTCAGA CAAGGGACTT CCAGGTAAGA AGAGTTTGTA CATACGCTTG GGATGCCGTG GCGATTGGCC CAATATCAAA CCGCCGGGAT GGGATCCGTC GTCTGACACC GGAGCTCATC CACAATTCAC ATAAACAGTT TCAAGACATG CTTTTTGCTC TCTCCTACAA ACGATGGTAT TTAAGTGTAA AAGAAGTTAT ATATTGGATG ATTTGAG 
Length1257
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15963157.. 15965138
Download Sequence
A.thaliana
AGI-codeAT2G35500.1
Descriptionshikimate kinase like 2
TAIR curator summary
Alias[SKL2][shikimate kinase-like 2]
Gene coexpression
MR
MR Locus Description
12.7279 Ahg479081 AAA-type ATPase family protein
13.1909 Ahg945162 photosystem II reaction center PSB28 protein
14.6629 Ahg493404 2Fe-2S ferredoxin-like superfamily protein
15.0665 Ahg492365 31-kDa RNA binding protein
24.6171 Ahg927898 polyribonucleotide nucleotidyltransferase, putative
26.3249 Ahg348440 chloroplast RNA-binding protein 29
28.9828 Ahg494966 tRNA synthetase class I (I, L, M and V) family protein
31.749 Ahg326886 DEAD box RNA helicase (RH3)
33.1662 Ahg470751 ribosomal protein L4
33.7639 Ahg951366 Ribosomal L29 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression