| Annotation |
|---|
| Description | jgi|Araly1|945600|scaffold_701829.1 |
| Sequence |
GGTTTCCGAC GTCTAGGCAC ATGAACCGAC GGCGACTTTT GGTATCGGCG ACACTGGTCT CGTACTTGCT CTACGGCATG GCTTTCGTCT CCGTTGAAGC CTCCGGTGGT ACTAAAATCA AACGTGAAAA GCTTAGAGAT TATCTGGATT TGACTAAAAC GACGACGTTG TCACCGAGCT CATCACATCG GAAAATGCTT CTTCTCTCTC CTGGTCCTGA AAAAGGAAAA GCAGAAAGCA GGGCAGAGCC GGAGAGAATC GGAGATAAGT GCAAGAGTAC GGACATAGTG GTGAACCAAG CAGTAACGGA ACCAATGCCT AACGGAATAC CAGGTTACAT GGTAGAGATA ACGAACCAGT GTATGTCTGG ATGCATAATT TCGAGGATCC ACATCAACTG CGGGTGGTTC AGCTCGGCTA AGTGGATAAA CCCAAGAGTC TTCAAGCGTA TTCACTACGA CGACTGTCTC GTCAACAACG GCAAGCCTTT ACCTTTTGGC TCCACTCTCT CTTTTCACTA CGCCAACACT TTCCCTTACC ATCTCTCTGT CGCCTTCGTG ACCTGTTCTT AGGTGGTGGC TTTTCTTTTA GT |
| Length | 592 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 6835931.. 6837392 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G24972.1 |
| Description | tapetum determinant 1 |
| TAIR curator summary | Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1. |
| Alias | [TPD1][TAPETUM DETERMINANT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.6629 |
Ahg483710 | peroxin 11D |
| 14.7309 |
Ahg496002 | Undecaprenyl pyrophosphate synthetase family protein |
| 20.5913 |
Ahg474875 | |
| 21.9773 |
Ahg495796 | Lactoylglutathione lyase / glyoxalase I family protein |
| 31.4643 |
Ahg493043 | |
| 36.4966 |
Ahg482707 | plasma membrane intrinsic protein 2 |
| 36.4966 |
Ahg950808 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase |
| 36.8646 |
Ahg326224 | copper/zinc superoxide dismutase 3 |
| 37.7889 |
Ahg335585 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein |
| 49.96 |
Ahg919257 | UDP-glucosyltransferase 75B1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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