Detail



ID : Ahg924607

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924607|scaffold_200168.1
Sequence
TGTAGTTGAT GTGTATGGTA ATGGGAAAAG GTAGAGTTAA AGCAGTGGAG AAAAGGGTTT TAGATCAGAA ACTCAGAGGA TCGATCAATG TTCCGTTAGG ACCTGTTTAT TATCCGACAG AAGAGGAATT CAAAGATCCA TTAGAGTATA TATACAAGAT CAAGCCAGAG GCAGAGGTTT ATGGTATTTG CAAGATTGTT CCACCTAGTA ATTGGAAACC TCCTTTTGGT TTGGATTTGG AATCTGTTAA GTTTCCAACA AAGACGCAAG AGATTCATCG GTTGCAGTTT CGTCCTGCTT CTTGTAATTC AAAGACGTTT CAGTTGGAGT ACAATAGGTT TTTGGAGGAG CATTTAGGTA AGAAGCTGAA GAAGAGAGTT GTTTTTGAAG GAGAAGAGTT GGATTTGTGT AAGCTGTTTA ACGCTGTGAA GCGGTTTGGG GGTTACGAAA AGGTTGTTAA AGGGAAAAAA TGGGGTGAAG TTTATCAGTT TATGAGCTCT GGTGAAAAGA TTTCTAAGTG TGCTAAGCAT GTTTTGTGTC AGTTATACAA AGAACATTTG CATGATTTCG AGAATTATCA CAATCGGATG AATGCAGATG CGTCAAAGGG TTGCAAAAGG AAAATTAATG CCGTTGAAAG GATTCGACGA TGTACTGAAT CTCGGAGCTC TAAGAGACGA AAAAGAAATG CTGATGTGAA AAATCCCAAG GTGGAAAAGG AGGAAGGGGT TGATCAAGCA TGTGAGCAAT GTAAAAGTGG GAATCACGGC GATGTGATGC TTTTGTGTGA TAGTTGTAAT AAAGGTTGGC ATATATATTG TCTCTCGCCA CCATTGGAGC ATATCCCACT TGGGAACTGG TATTGCCTGG AGTGTTTAAA CACTGATGAA GAGACTTTTG GCTTTGTTCC TGGTAAATGC TTATCACTTG AAGATTTTAA GCGTATTGCT GATCGCGCCA AAAGAAAGTG GTTTGGTTCA GGAACAGTGT CTAGGACGCA GATAGAGAAA AAGTTTTGGG AAATAGTAGA AGGGTCAGGT GGAGAGGTTG AAGTTATGTA TGGTAATGAC TTGGACACTT CTGTTTACGG GAGTGGTTTT CCTCGAATAG GGGACCAAAG ACCAGATTCA GTTGAGGCAA ATATTTGGGA TGAGTATTGT GGTAGCCCCT GGAATCTCAA TAACATGCCT AAGTTGAAAG GATCTATGCT TCAAGCCATT CGGCATAACA TTAATGGTGT TACAGTGCCT TGGCTGTATC TTGGAATGCT CTTCTCTTCT TTTTGTTGGC ATTTTGAGGA CCATTGTTTT TACTCTGTCA ATTATCTACA CTGGGGAGAG GCAAAATGTT GGTATGGTGT TCCAGGCAGT GCTGCTAGTG CTTTTGAAAA GGTCATGCGG AAAACCCTTC CCGATCTCTT TGATGCTCAG CCAGATTTGC TCTTTCAACT AGTTACCATG TTGAGTCCGA CTGTTTTACA AGAAAATAAA GTCCCGGTCT ACACAGTATT ACAGGAGCCA GGAAACTTCG TGATCACATT TCCAAAATCC TTTCATGCTG GATTCAATTT TGGTTTAAAT TGTGCAGAGG CCGTCAACTT TGCTACTGCT GATTGGCTAC CTCATGGTGG TTCTGGGGCG GAGCTGTATC GTCTGTACCG GAAACCTTCA GTGATATCTC ATGAAGAGCT TCTCTGCGTG GTAGCTAAGG GAAACTGTTG CAATACCGAA GGATCAATAC ATTTAAAGAA AGAATTGCTG AGAATATACA GCAAGGAAAA AAACTGGAGA GAGCAGCTCT GGAAAAGTGG TATTTTGAGA TCTTCTCCTA TGTTTCTGCC TGAATGCCCT GATTCTGTGG GCATCGAAGA GGATCCAACA TGCATCATCT GCCAGCAGTT TCTTCATCTT TCTGCTATCG TCTGCCATTG CAGGCCATCT GTTTTTGCAT GCTTGGAGCA CTGGAAGCAC CTTTGTGAAT GTGAACCTAC GAAGTTGCGT CTTGTATATC GTTATACCCT TGCCGAGTTG GATAGGATGG TACAAGAAGT TGAAAAGTTT GGTGGCTGCA AAACACAAGA AACCAAAAAC TCACAACGGC CAAGTTCAGG CACCAAACGA TCTATTGCTT TCAACAAAAA GCAGGAAGGA ATGCAAGTGA GTCAGGCACG ACCAGCAGAC AATTGGCTTC TTAGAGCATC AAAGGTTCTC GACGATGCCT TTTCTAGTGT TGAATATGCC ACTCTTTTAA AGGAAGCAGA ACAGTTTCTT TGGGCTGGAT CAGAAATGGA CCGTGTACGA GATGTTACAA AAAGTTTGAA CAAAGCAAAG ATATGGGCTG AAGCTGTTAG TGACTGTCTT TCAAAAGTCG AAGGTGAAGC CAACAATGAT TCAATGAAAG TTCACTTGGA ATTTATTGAT AAGTTGGTGA GAGTTAACCC CGTTCCTTGC TTTCAGTCTG GTTATCTGAA ATTAAAGGAT TATGCTGAAG TGGTTAGAAA GTTGTCTGAG AAAGTTGATT CAGCTCTGTC AAGTAGCCCA ACTATCACCC AGCTGGAGCT TTTGCATTCT GAAGTCTCCA GTTCACCAAT CTCCCTAATA AAACACGAGA TCTTATCAAA GAAAATCTCT TCCGCAAAGA TGTTAGCTAA AAGGGCGAGA CGCTATCTCG CAGACACTAA ACCTCCAGGA CTTGAAATGG ATGCACTTTT CAAGCTAAAG TCAGAGATGT TAGAGCTTCA GGTGCAACTT CCAGAAACAG AAGGGATTTT GGATTTGGTA AAGAAATCAG AATTAGCCCG TGATAAAAGT AACAAAGTTT TGACTGGTTC TTTATCTCTC GAGAATGTGG AAGAGCTGCT TCATGAATTC GATAGTTTCA GCATTAACGT TCCTGAGTTG ACTATCCTGA GGCAGTACCA CGTTGACACT TTGTCTTGGA TTTCACGCTT CAATGATGTA ATGGTTGATG TTCGTGAAGG CAAGGACCAA CAAAAGCTAA TTAGTGACCT GAGTTCCCTT CTACGGGATG GGGCATCCTT AGGCATTCAA GTTGAAGGAC TCCCTCTTGT TGAAGTTGAA TTAAAAAAGG CATCTTGCCG GAAAAAAGCT CGAACGGTTT ATACTGCAAG AAGGTCTCTG GATTTCATTG AGCAGCTGCT CTCGGAAGCT GTTGTTCTAC AAATCGAGGA GGAGGAGCTA TTTGTTGAGA TCTCTGGAAT TTTGTCAACA GCACGGTGTT GGGAAGAAAG AGCAAGCAGT ATCCTTGCTA GTGAAACTCA GATGTACGAC CTTAAAGATC TGGCAAGGAT GTCAATCAAC ATTGATGCGG TTTTGCCTTC TCTGAAGGGC ATAGAGAACA CAATCTCATC GGCTGAAACT TGGCTTCAGA AATCTGAGCC TTTTTTATCA GCCATTTGCT CTATGGCATC ATCTCCATGT TCTCTGCTTG AACTTCCTGT ATTAAAGGAC CTAGTTACTC AGTCTAAATC GCTTAACGTT CAGCTTCAAG AGCCACGAAT TCTTGAAACA CTGTTGCTTA ATTGCGAAAG GTGGCAGTGT GATAATCATC AGCTCTTGCA AGAAACTGAG GATTTGTTGG ACAATGCGAA AATAGATGAT GGCATGCATA ACAATATCCT TCCGAAGATT TTGGATTTGA TAACCAGAGT GGACTCTGCT AGAAAATCTG GTCTGTCCCT TGGTCTCAAT TTCGATGAAC TTCCCAAACT TCAAACTGCA AGTCTAAAAC TAGGATGGTG TTGTAAGACC ATCACGTTAA GCTCTAGCTC ACCTTCCTCT GAGTTGCTAG AAGATGTAGG AAAGCCCTCG TTACAGCAAA TTCAGCAGCA CATAAAAGAG GGACAAACAC TGGAAATATT ACCCGAAGAG TATTACTTAG GCAAGAGACT AATGGAGTTA GAAGGCACTG GACTGGAGTG GGCAAAACGA GCTAGAAAGG TGGTGACAGA CTCGGGTGCT CTTGCCTTAG AAGATGTTTT TGAGCTTATT TCTGAGGGTG AAAACTTACC TGTCCATGCA GAGCAGGAAC TTCAGTCTTT ACGAGCTCGG AGTATGTTAC ACTGCATTTG TCTAAAACCA TACAACTCAA GATCCATGGT TTCTTGTAGT CAATGTGGCG AATGGTATCA CACCTATTGT TTAAAACTTC ATTGGCGGCC TAAGGCTTAT GTCTGCTCCG CTTGCTGTCC ACTGGCGGAA TCCACTCCAC TGATTGATCC CGCCAGAGCA AAAGAGCCAG AGACACCGTC TCTGAACCAA AGACGGACAA GAATGGTTGC GACTGATGCA GCGGTTGATG ACTTACGGTG GAAAACCCGA AAACACATCA AACGAATAAC TAAACGGTGT CCTCAGGTTC ATATTCTTCC CTGGTTTTTC ACTTAAAAAC CAAGACAATA AACTCTT 
Length4427
Protein Sequence
Protein Residue
Map Locationscaffold_2: 791587.. 799704
Download Sequence
A.thaliana
AGI-codeAT1G63490.1
Descriptiontranscription factor jumonji (jmjC) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg948327 cullin4
6 Ahg935831 quiescin-sulfhydryl oxidase 2
7.68115 Ahg471269 S-locus lectin protein kinase family protein
12.2474 Ahg945213 NAD(P)H dehydrogenase B1
17 Ahg480233 Protein kinase superfamily protein
17.4929 Ahg480003 Homeodomain-like superfamily protein
18.0278 Ahg475653 LETM1-like protein
20.1494 Ahg476847 tubby like protein 1
20.4939 Ahg358554
24.454 Ahg495910 homolog of yeast FIP1 [V]
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression