| Annotation |
|---|
| Description | jgi|Araly1|948708|scaffold_800595.1 |
| Sequence |
GATCCGGGAC CTTGCCGGCG ATGACGGTGG CTCATTCTCA CCGGTTCTCG ACGGCGGTAA ATCCCATTAA CATAAGCTTG CTTTCAAAAC AACTACTTCA GCTTGGAAGA ACCAATAACA ACAATTCCAG TACCTTCTCA GAGATCAGTC ACCAAAGAGA GCTTCTAGTG TCTTCACTCA TCTCAAAGCT CGACGATTGC ATCAATCTCA ATCAAATCAA GCAAATTCAT GGTCATGTTC TCCGTAAAGG TCTCGATCAA AGCTGTTACA TTCTCACCAA GCTAATTCGC ACGTTAACCA AGCTCGGTGT TCCAATGGAT CCATATCCTC GCCGTGTAAT CGAGCCTGTT CAGTTCCGGA ACCCATTTCT ATGGACCGCA GTGATTCGTG GGTATACGAT TGAAGGTAAA TTCGATGAAG CTATTGCTAT GTATGGATGT ATGAGGAAAG AAGAGATTAC GCCAGTTTCT TTCACTTTCT CTGCTCTTTT GAAAGCTTGT GGATTAATGG GAGATTTGAA TTTAGGTCGG CAGTTTCATG CACAGACGTT TAGACTTAGA GGGTTTTGTT TTGTATATGT TGGGAATACA ATGATTGATA TGTATGTGAA ATGTGGGTCT ATTGTTTGTG CGCGTAAGGT GTTTGACGAA ATGCCTGAAC GAGATGTGAT TTCGTGGACT GAGCTTATTG CTGCGTATGC TAGAGTTGGG AATATGGAAT CTGCTGCGGA TTTGTTTGAA AGTTTGCCTA CGAAAGATAT GGTGGCTTGG ACTGCTATGG TTACGGGATT TGCGCAGAAT GCTAAACCTC AGGAAGCTTT AGAGTATTTT GATAGGATGG AGAAATCGGG AATTCGAGCT GATGAGGTTA CTGTGGCTGG ATATATATCG GCCTGTGCGC AGCTGGGAGC AAGTAAATAC GCTGATCGAG CTGTTCAAAT CGCTCAGAAA TCTGGGTATT CTCCTAGGGA TCATGTTGTT ATTGGGTCTG CGTTGATAGA TATGTACTCA AAATGCGGAA ATGTAGAAGA GGCAGTTAAT GTGTTTGTGT CGATGAACAA CAAAAACGTT TTCTCTTACA GTTCGATGAT CCTTGGTCTT GCTATGCACG GACGTGCTCA AGAGGCTTTA GATCTGTTCC ACTACATGGT AACGCAGACA GCGATAAAAC CAAACACGGT TACATTTGTT GGTGCGCTTA CGGCTTGCAG CCACTCGGGA CTCGTTGACC AAGGACGTCA AGTATTTGAT TCTATGTATC AAACATTCGG TGTTGAACCA ACGCGGGATC ACTATACTTG TATGGTCGAT CTTCTTGGCC GTGCAGGGCG GTTACAAGAA GCCCTTGAGC TGATTAAAAC TATGTCTGTT GAACCACACG GAGGTGTATG GGGTGCATTG CTCGGTGCCT GCAGGATTCA CAACAATCCA GACATAGCAG AGATTGCTGC AGAACATTTG TTTGAATTGG AACCGGACAT TATCGGAAAC TATATATTGC TCTCTAACGT CTACTCGTCA GCTGGAGACT GGGGCAGCGT TTTAAGAGTG AGGAAACTGA TTAAAGAAAA GGGTTTGAAG AAGACACCGG CGGTTAGTTG GGTTGTAGAT AAGAACGGTC AGATGCATAA GTTTTTCCCG GGAAACCTAA ACCATCCAAT GTCAAAAAAG ATTCAAGACA AGTTAGAAGA GCTTGTAGAA AGATTAACGG CACTAGGGTA TCAACCGGAT TTAAGCTCTG TGCCCTACGA CGTGAGTGAC AATGCAAAGA GGTTGATACT GATACAGCAC ACCGAGAAGC TGGCTTTAGC GTTCTCTTTA CTCACTACGA ACAGAGATTC TACAATAAAA ATAATGAAGA ATTTGAGGAT GTGCCAAGAT TGTCACATGT TTATGCGTTT AGCATCAGAG GTTACAGGGA GGGTGATTAT AATGAGGGAT AATATGAGAT TCCACCATTT TAGGAGTGGA GCTTGTTCTT GTGGTGATTT TTGGTGAGAA TCGAGATTGT AGACAGACTG |
| Length | 2020 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 3351093.. 3353108 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G44230.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg482628 | ENTH/VHS family protein |
| 11.9164 |
Ahg332244 | UDP-N-acetylglucosamine (UAA) transporter family |
| 17.4069 |
Ahg474332 | tRNAse Z3 |
| 18.7617 |
Ahg474572 | |
| 21.8403 |
Ahg925208 | binding |
| 24.3311 |
Ahg932895 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 30.9516 |
Ahg490126 | sensitive to freezing 6 |
| 32.1559 |
Ahg934908 | ubiquitin-specific protease 5 |
| 32.1714 |
Ahg486635 | Pentatricopeptide repeat (PPR) superfamily protein |
| 37.2022 |
Ahg924591 | GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|