| Annotation |
|---|
| Description | jgi|Araly1|949430|scaffold_801317.1 |
| Sequence |
AAACACAGAT ATATATAAAC ATGTCTTGTA ATAATAAAGC ATTATTAATC GGCAACAAAG TCGTCGTTAT ACTTGTATTC CTCTTATGCT TGGTTCACTC GTCAGAGTCA CTTCGGCCAC TCTTTGCATG CGACCCGGCA AACGGGTTAA CCCGGACGCT CCGGTTCTGT CGGGTCAATG TACCGATCCA TGTGAGGGTT CAAGATTTGA TCGGAAGGCT CACGTTGCAG GAGAAGATCC GCAACCTCGT CAACAATGCT GCCGCCGTTC CACGCCTCGG TATTGGAGGC TATGAGTGGT GGTCCGAGGC TCTCCACGGC GTTTCCGACG TTGGTCCTGG CTCTAAGTTC GGTGGTGCTT TTCCCGGCGC CACCAGCTTC CCTCAGGTCA TAACTACCGC AGCTTCTTTC AACCAGTCTC TATGGGAAGA GATCGGACGG GTGGTGTCTG ATGAGGCAAG AGCTATGTAC AATGGAGGCG TGGCCGGTCT GACATATTGG AGTCCAAATG TGAATATATT GAGGGACCCA CGGTGGGGCC GAGGCCAAGA AACTCCCGGA GAAGACCCTA TCGTCGCTGC AAAATACGCC GCCAGCTATG TCCGGGGACT TCAGGGCACC GCCGCCGGAA ACCGCCTTAA AGTGGCCGCA TGTTGCAAAC ATTACACTGC TTATGATCTT GATAATTGGA ATGGCGTCGA CCGTTTCCAC TTCAACGCTA AGGTCACCCA ACAAGATTTA GAGGACACAT ATAATGTGCC ATTCAAATCA TGTGTTTACG AAGGAAAGGT CGCGAGTGTA ATGTGTTCGT ACAACCAAGT CAATGGAAAG CCCACATGTG CTGATGAAAA TCTCTTAAAG AACACTATTC GTGGTCAATG GCGTCTCAAT GGGTACATTG TCTCAGATTG TGATTCTGTT GATGTTTTCT TCAACCAACA ACATTACACT AGCACTCCGG AGGAAGCCGC CGCCGCCTCC ATTAAAGCCG GTTTGGATTT GGATTGTGGG CCGTTTTTGG CGATTTTCAC GGAAGGTGCG GTGAAGAAAG GATTGTTAAC GGAGAATGAC ATCAATTTAG CACTTGCTAA TACATTAACA GTCCAAATGA GACTTGGTAT GTTTGATGGC AATCTTGGGC CATACGCTAA TCTTGGGCCA CGAGATGTTT GTTCTCTGGC CCATAAACAT TTAGCCCTTG AAGCAGCCCA TCAAGGAATT GTTCTTCTCA AAAACTCTGG TCGCTCTCTT CCACTCTCCC TCAGGCGCCA CCGCACCGTC GCCGTGATCG GACCTAACTC CGATGTCACT GAGACTATGA TCGGAAACTA TGCAGGGAAA GCATGCGCCT ATACGACGCC GTTGCAAGGA ATTTCAAGAT ACGCGAGGAC ACTTCACCAA GCTGGTTGTG CTGGCGTGGC TTGCAAAGGG AACCAAGGAT TTGGTGCGGC GGAAGCAGCA GCGCGTGAAG CCGACGCGAC GGTTCTTGTG ATGGGATTGG ATCAGTCGAT AGAGGCGGAG ACACGAGATC GAACCGGGCT TCTCTTACCG GGTTATCAAC AAGACCTAGT GACCCGTGTG GCTCAAGCTT CTAGAGGCCC AGTCATTTTG GTCCTTATGA GTGGTGGACC AATCGATGTA ACCTTCGCTA AGAATGATCC ACGTATTTCT GCCATCATTT GGGCCGGGTA TCCGGGTCAA GCGGGTGGAG CTGCCATCGC CAATATCATC TTTGGTGCTG CTAATCCTGG AGGAAAGCTA CCAATGACAT GGTATCCACA AGATTATGTG GCAAAAGTGC CAATGACGGT AATGGCTATG AGAGCATCCG GAAATTACCC AGGAAGGACA TACAGATTTT ACAAAGGTCC AGTGGTGTTC CCATTTGGGT TCGGTTTAAG TTACACTACC TTCACTAATA GTTTGGCCAA AAGCCCATTG GCCCAACTAT CAGTTTCACT CTCCAATCTC AACTCTGCCA ATGCCATTCT CAACTCTACA TCACACTCCA TCAAAGTGTC TCACACCAAC TGCAATTCGT TTCCGAAAAT GCCCCTCCAC GTGGAAGTGT CGAACACCGG TGAATTCGAC GGAACACACA CGGTGTTTGT CTTTGCCGAG CCGCCGAAAA ACGGAATAAA AGGATTGGGT GTGAACAAAC AGTTGATAGC GTTTGAGAAG GTTCATGTCA TGGCAGGGGC AAAACAGACC GTTCGAGTTG ATGTTGATGC TTGCAAGCAT CTTGGTGTAG TGGATGAGTA TGGAAAGAGG AGAATCCCGA TGGGTGAACA TAAGCTGCAC ATTGGTGACC TTAAACATAC TATTTTGGTC CAACCACAAC TTTGAGGGAG GCATATAAAA AACAA |
| Length | 2365 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12292158.. 12296527 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G49360.1 |
| Description | beta-xylosidase 1 |
| TAIR curator summary | Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. |
| Alias | [ATBXL1][BXL1][BETA-XYLOSIDASE 1][beta-xylosidase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg490494 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 6.16441 |
Ahg917381 | beta-galactosidase 4 |
| 6.78233 |
Ahg920058 | Glycosyl hydrolases family 32 protein |
| 7.74597 |
Ahg941577 | Raffinose synthase family protein |
| 8 |
Ahg496670 | beta-D-xylosidase 4 |
| 8.77496 |
Ahg490876 | cytochrome P450, family 91, subfamily A, polypeptide 2 |
| 8.94427 |
Ahg489028 | 5'-AMP-activated protein kinase beta-2 subunit protein |
| 9.8995 |
Ahg890129 | PEBP (phosphatidylethanolamine-binding protein) family protein |
| 16.1245 |
Ahg478409 | alpha-L-arabinofuranosidase 1 |
| 20.4939 |
Ahg495722 | expansin A14 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|