Detail



ID : Ahg950114

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950114|scaffold_802001.1
Sequence
TTTGGTGGTT GTTGTTGAAA AATGGCTGGT CGTGGAAAAA CTCTTGGATC CGGTGCGGCG AAGAAAGCCA CATCTCGGAG TAGCAAAGCT GGTCTTCAAT TTCCGGTGGG TCGTATCGCT CGATTCTTGA AAGCCGGTAA ATACGCCGAA CGTGTTGGTG CTGGTGCTCC GGTCTATCTC GCCGCCGTTC TTGAGTATTT GGCCGCCGAG GTTCTTGAAT TAGCTGGGAA CGCAGCAAGA GACAACAAGA AGACACGTAT TGTTCCTCGT CATATTCAGC TCGCTGTTAG AAACGATGAG GAGCTAAGCA AGCTTCTTGG AGATGTGACG ATTGCTAATG GAGGAGTGAT GCCTAACATC CACAATCTCC TTCTCCCTAA GAAGTCTGGT CCTTCAAAGC CACAGGAAGA TTAGGTCTTT AACACAATGA TATA 
Length434
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15674954.. 15675769
Download Sequence
A.thaliana
AGI-codeAT5G54640.1
DescriptionHistone superfamily protein
TAIR curator summaryIsolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein.
Alias[ATHTA1][HTA1][RAT5][histone H2A 1][RESISTANT TO AGROBACTERIUM TRANSFORMATION 5]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg359435
7.81025 Ahg492590 ACT domain repeat 7
20.8567 Ahg934359 PLAC8 family protein
23.9165 Ahg924903 Protein of unknown function (DUF761)
26.0768 Ahg479749 alternative oxidase 1A
33.7639 Ahg904035 Vacuolar protein sorting 55 (VPS55) family protein
36.2767 Ahg495334 heat shock protein 90.1
36.9459 Ahg479366 nucleolin like 2
43.4741 Ahg930190 ascorbate peroxidase 1
44.4972 Ahg928811 senescence associated gene 20
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression