Detail



ID : Ahg950835

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950835|scaffold_802722.1
Sequence
GAAGCATTAA GAGACCAGCC ATGGCTTCTT CTTCTTCAAT CTCATTCTCC TGCGCACCTT CTTTGGCCAC CTCACTCTTC TCCACTTCTT CTTCTTCTTC CCCAAGGCTG CTCTCCTCTA GATTTCTCGG AACCCGAAAC TTAAAGCTTC AGATCCGACC TGCCAGACTC GGACCCTCCA ATGGTTCAAG AACCACTTGC TGGTTCAAGT TCGGCAAGAA CGGTGTCGAT GCTGAAAATG CCGGTATCTA TGGCAGTCAG TCTCGCGATG ATTTCGACAG AGACGATGTT GAACAGTATT TCAACTACAT GGGTATGCTT GCGGTAGAAG GTACCTATTC AAAGATGGAA GCTCTTCTTA GCCTAAACAT TCACCCAGTC GATATCTTGT TGATGTTAGC CGCTACAGAA GGTGACAGAC CTAAGATCGA GGAGCTGCTC AAAGCTGGTG CTGATTACTC AGTCAAGGAT GCTGATGGAA GAACCGCTAT TGACAGAGCC AACAGTGAAG AGATCCGTGA TTTGATCCTT GGCTACAACG CTCAAAAGGC TTGAAGAACT TGTGCATTGG TATT 
Length574
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18533009.. 18533806
Download Sequence
A.thaliana
AGI-codeAT1G50900.1
DescriptionAnkyrin repeat family protein
TAIR curator summary
Alias[GDC1][LTD][Grana Deficient Chloroplast 1][LHCP translocation defect]
Gene coexpression
MR
MR Locus Description
14.4568 Ahg481568 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase
16.6433 Ahg946135 RAB GTPase homolog E1B
24.2487 Ahg488915
25.2587 Ahg938526 sedoheptulose-bisphosphatase
27.3313 Ahg484888 ribosomal protein L9
28.3549 Ahg485130 DnaJ/Hsp40 cysteine-rich domain superfamily protein
29.2404 Ahg475075
33.1662 Ahg922594 myo-inositol monophosphatase like 1
33.3317 Ahg485956 PsbP-like protein 1
33.4066 Ahg476610 Protein of unknown function (DUF1118)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression