| Annotation |
|---|
| Description | jgi|Araly1|951497|scaffold_803384.1 |
| Sequence |
AACGAAACCA TTCGGTGGTG ATGGGCCAAG CGCCGTCGTC TACGGCGGAA TCGAACGGAC GAGAGATTGA TTTGAGGTTA TGGTCTCCGG TGATTGTTGC TGGAGGAGAA TGGATGGCTT TGGGAAATGT CGTGGCGGTT AGAGATCGGG ATTTCACCGG AGATCTACCG GATGAGTGTT TAGCTCATGT GTTTCAGTTT CTTGGAGCTG GAGATCGGAA GCGATGCTCT CTTGTTTGTA AACGGTGGTT GTTCGTTGAC GGTCAGAATC GTCATCGGTT ATCTCTTGAT GCTAAGGATG AGATCTTCCC TTTCCTGACT TCTATGTTCA ATCGATTCGA TTCGGTGACT AAGCTTGCTC TCCGATGTGA TCGGAAGTCT GTTAGCTTGA GCGATGAAGC TTTGGCTATG ATCTCTGTTC GTTGTTTGAA TCTGACTCGT GTTAAGCTTC GTGGTTGTCG CGAGATTACG GATCTGGGAA TGGAAGAGTT TGCTAGGAAT TGTAAAAATC TAAAGAAGCT ATCTGTTGGA TCTTGCAATT TTGGAGCTAA AGGCGTGAAC GCGATGCTCG AACATTGTAA GCTTCTGGAG GAATTGTCGG TGAAGCGACT TCGAGGAATT CATGAAGCAG CCGAGTTGAT TCACCTGCCT GCTGGTTCAT CTTCTTCGCT CAGGTCGATT TGCTTGAAGG AGCTCGTTAA TGGCCAGGTA TTTGAACCAT TGGTTGCTAC TACAAGAACA CTGAAAACAC TTAAAATCAT TCGTTGTTTG GGTGATTGGG ATAGAGTTCT TCAGATGATT GGAGATGGTA AGAGTTCTTT AAGTGAAATT CACCTAGAGA GGCTCCAAGT GAGTGACATT GGGCTATCTG CGATATCTAA ATGCTCAAAT GTAGAGACAT TGCATATAGT GAAAACTCCA GAATGCTCAA ACTATGGTCT GATTAATGTA GCTGAGAGAT GTAAGCTGCT GAGGAAACTT CATATTGATG GTTGGAGGAC TAATAGGATT GGTGATGAGG GTCTCATGTC TGTAGCTAAA CACTGCTTAA ACTTACAAGA ACTTGTGCTG ATTGGTGTTA ATGCAACACA TATGAGTTTA GCAGCCATTG CTTCAAACTG TGAGAAGCTT GAACGATTAG CACTTTGTGG AAGTGGAACA ATAGGCGATA CAGAGATCGC TTGCATCGCT AGGAAATGTG GAGCATTGAG GAAATTCTGT ATCAAAGGAT GTCCTGTTTC GGATCGAGGG ATTGAGGCGC TCGCTGTGGG TTGTCCTAAT CTGGTGAAAT TGAAGGTGAA GAAATGTAAA GTGGTAACTG GAGAGATTGG AGATTGGCTG CGTGAACAAA GGAGGACACT TGTGGTGAGT ATGGATAGTG ATGAAACCGA AGCGGTGGTG GTGGTGGATG GTGAGGTTGA AACCGTTGTC GAGGAGCCGA GGGTGGTTCA AGCAGGTGGA ATTGTGGCAG AGATTGGTTC AGGTAATAGT GGTGGCAACA ATGGAGGAAG TAGATTAGCA ACGATTAGGT CAAAGTTAGG GTTTCTTGCT GGAAGAAACT TGGTAACTTG CACATTCAGA AGATGGTCTC ATAATGATAA TGCTAGTAGT TCTACTGAGC TATAACTATA AAAACGGTAA TTGTC |
| Length | 1645 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 21048215.. 21049869 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67250.1 |
| Description | SKP1/ASK1-interacting protein 2 |
| TAIR curator summary | Encodes an SKP1 interacting partner (SKIP2).Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2, and 3. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. |
| Alias | [SKIP2][VFB4][SKP1/ASK1-interacting protein 2][VIER F-BOX PROTEINE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg473749 | basic region/leucine zipper motif 60 |
| 4.69042 |
Ahg329973 | Protein phosphatase 2A regulatory B subunit family protein |
| 5.47723 |
Ahg490469 | Ubiquitin-like superfamily protein |
| 6.32456 |
Ahg470813 | ER-type Ca2+-ATPase 1 |
| 7.87401 |
Ahg328224 | BR-signaling kinase 1 |
| 10.7703 |
Ahg493153 | SCARECROW-like 13 |
| 11.5758 |
Ahg479481 | magnesium transporter 4 |
| 12 |
Ahg472958 | |
| 13.784 |
Ahg491431 | ENTH/VHS/GAT family protein |
| 13.9642 |
Ahg473798 | amino acid permease 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|