Detail



ID : Ahg312278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312278|fgenesh1_pm.C_scaffold_1001058
Sequence
ATGGGTCCAG TCTCAAGTTC TTGGAGTTTC AACAAATTCT TCGCTATAGT TTGCGTTGTT TTCGCCATAT CCGGTGAGTT CGTCGCCGGA TACTATCGAC CAGGCCCATG GAGATATGCT CACGCCACTT TCTACGGTGA TGAGACCGGT AGTGAAACCA TGGGTGGTGC ATGTGGGTAC GGAAACCTTT TTAACAGCGG CTACGGACTG TCCACGGCGG CGCTAAGCAC GACATTGTTC AAAGATGGTT ACGGATGTGG CCAATGTTTT CAAATAACAT GTTCGAAATC ACCTCATTGT TACTACGGAA AATCAACCGT TGTCACAGCC ACCAATCTTT GCCCTCCTAA TTGGTACCAA GACTCCAACA ATGGTGGTTG GTGCAATCCT CCTAGAACCC ATTTCGATAT GGCTAAACCG GCTTTCATGA AACTCGCTAA CTGGAAGGCC GGTATCATCC CAGTTGCCTA CCGAAGAGTG CCATGCCAAA GGAGTGGAGG TATGAGGTTT CAATTCCAAG GTAATTCTTA TTGGCTTCTC GTCTTCGTCA TGAACGTTGG TGGCGCCGGA GACATCAAGA GCATGGCCGT GAAAGGTAGC CGCACAAATT GGATAAGTAT GAGCCATAAC TGGGGAGCCT CTTACCAAGC TTTTTCCTCT CTTTACGGTC AATCTCTCTC TTTCCGGGTC ACTTCATACA CCACCGGTGA AACCGTCTAT GCTTGGAACG TTGCTCCGGC TAACTGGAAC GCCGGTATGA CTTACAAGAG CACCGCCAAT TTCCGTTGA 
Length789
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4854458.. 4855486
Download Sequence
A.thaliana
AGI-codeAT1G12560.1
Descriptionexpansin A7
TAIR curator summaryMember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell.
Alias[ATEXP7][ATEXPA7][ATHEXP ALPHA 1.26][EXP7][EXPA7][expansin A7]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg922754
5.56776 Ahg921896
10.8628 Ahg931828
14.4914 Ahg320775 GDSL-like Lipase/Acylhydrolase family protein
18.7617 Ahg930451 glycine-rich protein
23.0217 Ahg891369 Family of unknown function (DUF577)
24.8193 Ahg936753 zinc finger (C2H2 type) family protein
24.98 Ahg925761 CLAVATA3/ESR-RELATED 18
29.5466 Ahg917344 D-arabinono-1,4-lactone oxidase family protein
30.1662 Ahg951548 F-box family protein with a domain of unknown function (DUF295)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression