Detail



ID : Ahg312965

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312965|fgenesh1_pm.C_scaffold_1001745
Sequence
ATGGCGGATT CCCAAAGATC ATCGTCATCG CTGATCAATC CTAGAAATGG TTTCTGTGTT GCAAACTCAA CATTCTACAG TAAACGCAAC CCATTGCAAC TTCCAGCGAA CACCTCGCTT GACGTCACAA CATTTATGGC CTCTCAAGCT CATTGTGGCA CTACTGCCTT CATCGACGCG GCCACAGGTC ACAGTATAAG CTTCTCCGAT TTCTGGAGAG CCGTTCATAA TGTCGCCGAC TGTCTCCACC ATGACATCGG CATAAGGAGA GGTGACGTCG TACTCATCCT CTCCCCTAAC TCCATCTCCA TCCCCGTCGT AAGCCTCGCC GTCATGTCCC TAGGGGCCGT CATAACCACC GCGAATCTTC TGAACACTGC CAGTGAGATC TCTAGACAGA TTGCAGACAG CAAGCCAAAG CTGGCCTTCA CAACTCCTGA GCTAGCCCCA AAACTCGCAG CCTCCGCCGA TATCTCTGTT GTCTTGACGG AGGAGGAAGA GGAAGAGCGC GTGAGATACA CTCGGGGAGT CAGGGTCGTT GGGGTTTTAA CCGAGATGAT GAAAAAGGAA CAGAGTGGTC CGCGAGTCAG AGACCGAGTT AACCAAGACG AAACGGCGAT GCTGCTCTAC TCGTCGGGAA CCACAGGAAG AAGCAAAGGA GTGGATTCGT CTCACAGAAA CTTAATCTCG CACATAGCAA GATACATCGC CGAGCCATTT GAGCCAAATC AGACTTTCCT CTGCACCGTT CCGATGTTCC ACACCTATGG ATTACTGATC TGCGCCATGG CCACCGTAGC GTTAGGTTCG ACTCTGGTAA TTCTCCGGAA GTTTGATCTC CACGATATGT TGGCGGCAAT CGAGAAATAC AGAGCCACGA CTCTGGTTTC GGCGCCGCCG GTTTTGATAG CTATGATCAA CGGCTCAGAG CTTATCAAGG CCAAGTACGA TTTGACCTCC CTGAAAACGG TTAGATCCGG TGGATCCCCG TTGAGCAAGG AGGTTACAGA TAGCTTCCTT GAGAAATATC CAACGGTTGA TATTTTTCAA GCGTACGCTT TAACGGAATC AAACAGCGCG GGGGCTTCCA TAGATTCGGT GGAGGAGAGT CGGAGATATG GTGCCGTTGG GAAGTTGTCG TCCGGCGTGG AAGCGATGAT TGTAGATCCG GGTTCGGGTC GGATCTTGGG TGAGAACCAA ACGGGAGAGC TTTGGCTCAA AAGTCCCGCC ATTGCAAAAG GTTATTTTAG AAACGAAGAA GCTACAAAAG AAGCTTTTAA TTCAGAAGGA TGGCTTAAAA CTGGAGATCT CTGCTACATC GACCATGATG GATTTCTTTT TGTTGTGGAT CGATTGAAAG AAGTTATCAA ATACAAAGCT TACCAGGTCC CTCCAGCTGA ACTAGAAGCT TTGCTGCTCC CTCATCCTGA AATCACTGAT GCCGCAGTGA TCCCGTTTCC GGACAAAGAA GTGGGGCAAT TTCCGATGGC GTGCATTGTA CGAAAAAGTG GAAGCTACTT ATCAGAGAAG TCGATAATGG AGTTTGTAGC GAAACAAGTG GCACCGTACA AGAAGATACG AAAAGTGAAA TTCATGTCTT CTATACCAAA GAATCCTTCA GGCAAGATTC TACGTAAAGA TCTCATCCAG CTCCTATATT TTCTTGGTAA AGGGTTTATC ATATCTCTCA TTGATCCCAG AAGCGGTTTC TGCAAATCAA ACTCTACATT CTATAGCAAG CGCCAACCAT TGAGTCTCCC GCCAAATCTG TCGCTTGACG TCACTACATT CATCTCTTCT CAACCGCACC GCGGCACAAC CGCCTTCATC GACGCCGCCA CGGGCCAACG TTTAAGCTTC TCCGATCTCT GGAGAGCTGT TGATAATGTC GCTGACTGTC TTTATCATGA CGTCGGAATA CGGAGAGGCG ACGTCGTCCT CATCCTCTCT CCAAACTCAA TCTACATTCC CGTCGTTTGC CTCTCCGTCA TGTCTCTCGG CGCCGTCGTC ACTACCGCCA ACACTCTCAA CACCGCCGGT GAGATCTCTA AACAAATCGC CGACAGTAAT CCAACTCTCG TCTTCACCAC TCGCCAGCTG GCACCCAAAC TCTCCGCCGC TATCTCCGTC GTCCTCACCG ACAACGAAGA CGAGGAGCCT GTGGAGTTCA CTCGCGTGGT CAGAGTCGTT GGGGTTTTGA GCGACATGGT GAAGAAAGAA CCGAGTGGGA AACTAGTCAG AGACCGAGTC AACCAGGACG ACACGGCGAT GATGCTTTAC TCGTCGGGAA CCACAGGACC GAGCAAAGGT GTGATCTCGT CTCACCGGAA TTTAACAACT CACGTGGCGA GATTCATATC GGATAATTTG AAACGAGACG ATATTTTCAT ATGTACCGTC CCGATGTTCC ACTCCTACGG GTTATTGGCC TTCGCTATGG GCACCGTAGC ATTGGGTTCG ACGGTGGTGA TCCTCCGGAG ATTCCAGCTC CACGATATGA TGGATGCGGT GGAGAAGCAT CAAGCCACGG CTCTGGCTTT GGCGCCACCG GTTTTAGTAG CTATGATTAA CGACGCAGAT CTGATCAAGG CTAAGTACGA TTTGAGCTCA CTAACAACGG TGAGGTGTGG TGGAGCACCG TTGAGCAAGG AGGTGACTGA AGGGTTTCTA GAGAAATATC CGACGGTTGA TATACTCCAG GGGTATGCTT TGACCGAATC CAACGGCGGA GGGGCTTTCA CGAATTCAGT GGAGGAGAGC CGGAGATATG GCACGGCGGG GATGTTGACG TCTGATGTGG AGGCGAGGAT CGTGGATCCG AATACGGGTC GGGTCTTGGG AATTAACCAA ACGGGTGAGC TCTGGCTCAA GGGTCCTTCA ATTTCTAAAG AGGATGGGTT TCTTTTTGTT GTTGATCGAT TGAAAGAACT GATCAAATAC AAAGGCTATC AGGTACCTCC AGCTGAACTA GAAGCTCTTC TAATTACTCA TCCAGACATT CTCGATGCCG CCGTTATTCC GTTTCCGGAT AAAGAAGCAG GACAGTATCC GATGGCATAC GTGGTACGAA AACATGAGAG CAATCTCACT GAGAAACACG TTATTGACTT CATCTCTAAG CAGGTAGCAC CATATAAAAA AATAAGAAAG CCTCATCGCG GTAAAACTGT ATTCGTCGAC GCCGTAACCG GTCGTCGTCT TAGTTTCCCC GAGCTCTGGC TCGGTGTCGA AAGAGTCGCG GCTTGTCTTT ACGCATCAGG TGTACGCAAG GGAAATGTCG TCATTATACT CTCTCCAAAC TCAATCCTCT TCCCGATCGT CTCCCTCTCC GTAATGTCAC TCGGCGCAAT CATCACCACA GCTAATCCGA TCAACACTTC CGACGAAATC TCCAAACAGA TCGGCGATTC GCGTCCTGTT CTCGCCTTCA CCACATGCCA ACTCCTCTCC AAACTCGCCG CCGCGTCGAA TTCGAATCTC CCGGTGGTTC TCATGGACGA AAACCACGTG CCTTCACAAA CTCACAGTGA CCGCGTGAAA ATAGTCGGGA GGTTAGAGAC GATGATTGAA ACGGAACCAA GTGAGTCACG AGTTAAGCAA CGAGTCAACC AGGACGACAC GGCGGCTCTG TTATACTCAT CAGGCACGAC GGGGACGAGT AAAGGAGTAA TGCTGAGTCA CCGTAACCTA ATCGCATTGG TACAAGCATA CCGGGCCCGG TTTGGTTTAG AGCAGCGAAC CGTTTGCACA ATCCCAATGT GTCACATATT CGGATTCGGT GGTTTCGCGA CGGGGCTAAT CGCGTTAGGA TGGACAATCG TTGTTCTTCC CAAATTCGAT ATGGCTAAGC TTCTCTCGGC GGTGGAGATT CACCGTTCTT CGTACCTTTC TCTTGTACCC CCGATTGTGG TTGCTATGGT TAACAGAGCA AATGAGATCA ATTCCAAGTA CGATCTGAGC TCGTTGCACA CTGTGGTGGC TGGAGGAGCT CCGTTGAGTA GAGAGGTGAC GGAGAAGTTC GTTGAGAATT ATCCGACGGT TAAGATTCTA CAAGGCTATG GTTTGACTGA GTCAACGGCT ATAGCTGCTT CTATGTTTAA TAAAGAGGAG ACTAAGAGGT ATGGAGCTTC TGGATTATTG GCTCCAAATG TGGAAGGTAA GATTGTGGAT CCGGATACGG GTCGGGTTTT GGGTGTGAAT CAAACGGGTG AGCTGTGGAT TCGAAGTCCC ACTGTGATGA AAGGTTATTT CAAGAACGAA GAAGCTACTG CTTCTACTAT TGATTCAGAA GGATGGTTGA AAACTGGCGA CTTGTGTTAC ATTGACAGTG ATGGGTTTGT CTTTGTTGTT GATAGATTAA AGGAGCTCAT CAAATGCAAT GGTTATCAGG TTGCTCCAGC TGAACTAGAG GCATTGTTGC TTGCTCATCC AGAGATTTCT GATGCAGCAG TAATACCCAT CCCTGACATG GAAGCTGGAC AATATCCAAT GGCATATATC GTAAGGAAAG CTGCAAGTAA CTTATCCGAA AACGAAATCA TGGGGTTTGT CGCAAAACAG GTATCACCGT ACAAGAGGAT TCGCAAAGTC ACATTTTTAG CTTCAATCCC CAAAAATCCT TCTGGCAAGA TTTTAAGAAG AGAACTTATA AAGCTCACAA CTTCAAAGCT CTAG 
Length4674
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G20480.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg920074
36.6606 Ahg323669 GATA transcription factor 6
45.299 Ahg906792
52.2494 Ahg472691 Galactosyltransferase family protein
56.3915 Ahg480902 Glycosyl hydrolase superfamily protein
62.6738 Ahg951821
76.818 Ahg932866
89.6214 Ahg924070 SKU5 similar 12
90.2774 Ahg339407 MATE efflux family protein
94.6942 Ahg942744
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression