Detail



ID : Ahg920074

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920074|scaffold_101355.1
Sequence
AGAAACTTTT TTTTCTTCTG ATGGCGACGA CTAACGCTCA CACGGCGGCT CAACAGACTC CACCTCCTCC TCCTCCAGCA CCTGCTCCTC CGGCGATCGA TGGGTTAACA ACAGACGAGC TAACAGCAAA AGCTTTAAAC AAGAGATACG AAGGTTTAAT GACGGTGAGA ACAAAAGCAG TGAAAGGTAA AGGCGCGTGG TATTGGACTC ATCTTGAACC TATCCTCGTA CGCAACACCG ACACTGGTCT CCCTAAAGCC GTGAAGCTCC GTTGTTCTCT ATGCGACGCC GTTTTCTCCG CCTCTAATCC TTCACGCACT GCCTCTGAGC ATCTCAAACG CGGCACTTGC CCCAATTTCA ACTCCGTTAC TCCCATTTCC ACCATCACTC CTTCTCCTAC CTCTTCCTCT TCCTCTCCTC AAACTCATCA CCGGAAACGC AACTCCTCCG GCGCTGTCAC CACCGCTGTT CCTTCTCGGC TTAATCCTCC TCCCATCGGA GGCTCTTATC ACGTCACGCC GATAACCGTC GTTGATCCTT CGAGGTTTTG CGGCGGAGAG TTGCATTATA CAACTCCGCC GCCGCAGCAT TTGATGCTCT CCGGTGGAAA AGACGATTTG GGTCCTTTAG CTATGCTTGA AGACAGTGTG AAGAAGCTTA AGAGTCCTAA ACCGTCGCAG ACGCAGTCTC TTACCAGATC GCAGATAGAG TCAGCTTTAG ATTCTCTCTC TGATTGGGTC TTCGAATCTT GCGGCTCTGT TTCTCTCTCG GGTCTTGAGC ATCCAAAGTT TCGAGCTTTT TTAACCCAAG TGGGTTTACC AATCATCTCC AAGAGAGATT TCGCCACCAC GAGATTGGAC TTGAAGTACG AGGAAGCTAG AGCAGAGGCT GAATCAAGAA TCAGAGACGC AATGTTCTTC CAAATCGCAT CGGACGGTTG GAAATCAGGA GAATCCGGCG AGAGTCTCGT GAATTTGATT GTGAATTTAC CAAACGGGAC GAGTTTGTAC AGAAGAGCGG TTCTGGTGAA CGGAGCTGTG CCGTCGAACT ACGCAGAGGA AGTCTTGTTG GAGACGGTGA AGGGCATTTG TGGAAATTCA CCTCAGAGAT GTGTTGGGAT AGTCTCTGAT AAGTTTAAGA CCAAAGCACT GAGGAATCTT GAGAGTCAGC ATCAATGGAT GGTGAATCTT TCTTGTCAGT TTCAAGGACT CAACAGTTTG ATCAAAGATT TCGTAAAAGA GCTTCCTTTG TTCAAATCTG TTTCACAAAA CTGTGTGAGA CTAGCCAAGT TCATCAACAA CACGGCGCAG ATACGAAACG CTCACTGTAA GTATCAGCTG CAGGAACATG GAGAATCTAT AATGCTTAGA TTGCCTGTAC ATTGCTATTA CGACGATGAA CGTAGAAGTT GTAGTAGTAG TAGTAGTAGT AGTAGTAGTA GTAACAAGGT TTGTTTCTTT GAGCCGTTGT TTAATCTTCT TGAGGATGTG TTGAGTTCCG CTAGAGCAAT CCAGTTGGTA ATGCATGATG ATGCTTGTAA GGTTGTTTTA ATGGAGGATC ATATGGCTAG GGAGGTTAGA GAGATGGTTG GGGATGAAGG GTTTTGGAAC GAGGTAGAGG CGGTTCACGC TTTGATCAAG CTTGTTAAAG AGATGGCTCG GAGAATAGAG GAAGAGAAGC TGCTTGTTGG GCAATGCCTA CCGCTATGGG ATGAGCTAAG AGCTAAGATT AAAGATTGGG ATTCTAAGTT TAATGTAGGA GAAGGACATG TGGAGAAACT CGTTGAGAGA AGATTCAAGA AGAGTTATCA TCCGGCTTGG GCTGCGGCTT TCATACTCGA CCCTCTTTAC TTGATAAGAG ATAGTAGCGG AAAGTATCTT CCTCCGTTCA AATGTTTGTC GCCCGAGCAA GAGAAAGATG TAGATAAGTT GATAACAAGG CTTGTGTCTA GAGACGAGGC ACACATTGCT TTGATGGAAC TAATGAAATG GAGAACCGAA GGGCTTGATC CTATGTATGC AAGGGCGGTC CAAATGAAAG AGCGTGACCC GATTTCCGGA AAGATGAGGA TAGCGAATCC TCAAAGCAGT AGACTTGTTT GGGAGACGTA TCTTAGCGAA TTCAGGTCGC TAGGGAAAGT TGCGGTAAGG CTCATTTTCC TCCACGCGAC TACTGGAGGG TTCAAATGCA ATTCCTCTCT TTTGAAATGG GTAAACTCGA ACGGGCGGTC ACATGCAGCC GTAGATCGAG CTCAAAAGCT GATCTTCATA TCCGCTAACT CGAAGTTCGA AAGGAGAGAT TTCTCAAACG AGGAGGATAG GGATGCGGAG CTGCTCGCTA TGGCTAACGG TGATGATCAT CTGCTTAACG ATGTTCTTGT CGATACATCC TCGGTGTGAC ATTTGAATCT CTTTTTGAT 
Length2419
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4785176.. 4787591
Download Sequence
A.thaliana
AGI-codeAT1G12380.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg338071 GRAS family transcription factor
11.3137 Ahg472719 galactosyltransferase1
12 Ahg312965 AMP-dependent synthetase and ligase family protein
12 Ahg946315 receptor like protein 51
14.2478 Ahg489965 Papain family cysteine protease
20.7846 Ahg474258 ABC-2 type transporter family protein
22.8473 Ahg889572 Uncharacterised protein family (UPF0497)
23.4094 Ahg496428 end binding protein 1B
27.1293 Ahg472691 Galactosyltransferase family protein
28.3901 Ahg496986 Chalcone-flavanone isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression