Detail



ID : Ahg924070

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924070|scaffold_105351.1
Sequence
TAATAATAAA GTTTACTATT AATGAAGGGA GGGGTTAAAC TTTTGGCCGT GTGCCTTTGT GTGGCCACGG CGACCGTCAT GATGGTCCAA GCGGAGGACC CTTACTTCCA CCACGTGTGG AATGTGACGT ACGGAACCGC ATCTCCTCTA GGCGTTCCAC AACAAGTCAT TCTCATTAAC GGTCAATTCC CTGGTCCTAA CATCAACTCC ACTTCTAACA ACAACGTCAT CGTTAATGTT TTCAACAACC TCGACGAGCC TTTCCTCATT ACCTGGAATG GAATCCAGCA CAGAAAGAAC TGCTGGCAAG ATGGAACAGC TGGAACAATG TGTCCCATCC CTCCGGGTCA GAACTTCACA TACCATTTCC AGCCAAAGGA TCAAATCGGT AGCTACTTCT ACTACCCGAC CACAGCCATG CATCGTGCCG CTGGTGGCTT TGGTGGCCTT CGTGTGAACA GCCGTCTCTT GATCCCGGTT CCGTACGCTG ACCCTGAAGA TGACTACACT GTCCTTATCA ACGACTGGTA CACCAAAAGC CACACTCAGC TCAAGAAGTT TCTCGACAGT GGTCGCACTA TTGGCCGTCC AGATGGCATT CTCATCAACG GTAAATCCGG GAAAACTGAT GGCTCTGACA AACCTCTTTT CACCTTGAAG CCAGGAAAAA CCTACAGAGT CCGTATCTGT AACGTGGGTC TCAAGGCATC TCTTAACTTC AGAATTCAGA ACCACAAAAT GAAGCTTGTC GAGATGGAAG GTTCACACGT TCTACAAAAC GACTATGACT CCCTTGATGT CCATGTCGGT CAGTGTTTTG GTGTAATCGT CACGGCAGAC CAAGAACTTA AAGATTACTA CATGGTTGCT TCCACAAGGT TCTTGAAGAA ACCTTTGACA ACGACAGGGT TACTCCGCTA CGAGGGAGGC AAAGGTCCTG CCTCTTCTCA GCTACCTGCC GCCCCCGTTG GTTGGGCTTG GTCTTTGAAC CAGTTCCGAT CTTTCAGGTG GAACTTGACA GCCAGCGCAG CTAGACCTAA CCCACAAGGC TCGTACCACT ACGGTAAAAT TAACATCACT CGCACCATCA AGCTCGTGAA CACTCAGGGA AAGGTCGATG GCAAGCTTAG GTACGCGTTG AGCGGGGTCT CCCACACCGA CCCTGAGACA CCTCTCAAGC TCGCTGAGTA CTTCGGCGTT GCTGATAAGG TTTTCAAGTA CGACACCATC TCGGACAACC CAAATCCCGA TCAGATCAAG AACATCAAGA TCGAACCCAA TGTTCTTAAC ATCACTCACC GCACCTTCAT TGAAGTCGTG TTCGAGAACC ACGAGAGGAG TGTCCAGTCT TGGCATTTGG ACGGCTATTC CTTCTTCGCT GTAGCGGTTG AGCCAGGGAC ATGGACACCA GAGAAGAGGA AGAACTACAA CCTTCTAGAC GCAGTGAGCC GACACACAGT CCAGGTCTAC CCCAAGTGTT GGGCTGCAAT CTTGCTCACA TTCGACAACT GTGGAATGTG GAACATTAGG TCGGAGAACT CAGAGAGACG TTACTTGGGA CAGCAACTGT ACGCAAGCGT CTTGTCACCG GAAAAATCTC TCCGGGACGA ATACAACATG CCGGAGACAA GCCTCCAATG TGGTCTCGTC AAGGGCAAGC CTAAGGTTAA CCCTTATGCC GGAGCTTAAT ATTTTCTTTG AGATTATTT 
Length1709
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27922450.. 27924370
Download Sequence
A.thaliana
AGI-codeAT1G55570.1
DescriptionSKU5 similar 12
TAIR curator summary
Alias[sks12][SKU5 similar 12]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
3.87298 Ahg929770 Protein kinase superfamily protein
7.4162 Ahg922881 Plant stearoyl-acyl-carrier-protein desaturase family protein
7.93725 Ahg478720 SKU5 similar 11
9.48683 Ahg951821
12.7279 Ahg896008 pectin methylesterase 38
14.2829 Ahg483677 LOB domain-containing protein 18
14.4914 Ahg946330 PYR1-like 13
16.9411 Ahg481945 LOB domain-containing protein 13
17.4929 Ahg931324
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression