Detail



ID : Ahg313108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313108|fgenesh1_pm.C_scaffold_1001888
Sequence
ATGAAGATTA CGGATGCTGC GGGAAAGATC GAGACTTTGG TCGATTCATT GAGGGATATG TCCCCGACCC GTGTCAGATC TTCCTCCTCT GATGAACATG TATCCGAGAA CGATGACGAG AGAAGCTCCT GGATTGCACG TCATCCGTCC GCATTAGATA TGTTCGACAA AATCATGACT GATGCAGAAG GCAAACAAAT TATTATGTTT CTTGACTACG ATGGAACTCT CTCACTAATC ACTGAAGATC ACGACAAAGC TTACATAACC GACGAGATGC GAGAAGTTGT AAAGGAAGTG GCTACGTATT TCAAGACTGC GATCATCAGC GGACGAAGTA CTGACAAAGT ACAGAGTTTT GTGAAACTCA CTGGAATTCA CTACGCCGGT AGCCACGGCA TGGACATTAA GGGTCCGACA AATACCGATC AGAGTAACCA AGGAGAAGTG ATGTTTCAAC CTGCAAGTGA CTATTTACCG ATGATTGACG AGGTGGTTAA CGTTTTAAAG GAAAAGACAA AATTTATCCC TGGAGCTACG GTCGAGCACA ACAAGTTTTG TCTAACAGTA CATTTTCGTC GCGTTGATGA AACGGGATGG GCTGCACTAG CCGAGCAAGT GAGATTGGTT CTCATTGATT ATCCCAAATT GAGACTGACA CAAGGCAGAA AGGTGTTAGA ACTCCGACCT TCCATCAAAT GGGACAAGGG AAAGGCTCTT GAATTTTTGC TAAAGTCATT AGGGATAGCT GAATCTAAAG ATGTTTTACC GGTGTACATT GGAGATGACC GTACTGATGA AGATGCATTT AAGGTTTTAT GTGAAAGGGG ACAAGGTTTT GGGATTGTCG TCTCAAAAAC TCTTAAGGAA ACCTACGCCT CCTACTCTCT TCAAGACCCA TCTCAGGTTA AAGAATTTCT GGAGCGTTTG GTAAAGTGGA AGAAACAAAC ACTTGGAGAA GAAGAAGAAG TGATTCATAC GATAGATTGA 
Length990
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9293318.. 9295708
Download Sequence
A.thaliana
AGI-codeAT1G22210.1
DescriptionHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
TAIR curator summary
Alias[TPPC][trehalose-6-phosphate phosphatase C]
Gene coexpression
MR
MR Locus Description
9.59166 Ahg897008
19.7484 Ahg359210
32.8786 Ahg938956 protein kinase family protein
39.6737 Ahg494336 Ca2+ activated outward rectifying K+ channel 2
39.8623 Ahg316004 Protein of unknown function (DUF1163)
40 Ahg320100 AGAMOUS-like 17
40.9268 Ahg341194 Homeodomain-like superfamily protein
43.9318 Ahg925160
51.4976 Ahg887586
55.7494 Ahg482014 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression