Detail



ID : Ahg320100

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320100|fgenesh1_pm.C_scaffold_4000157
Sequence
ATGGGGAGAG GGAAGACTGT GATCCAGAAG ATCGATGATT CAACGAGTAG GCAAGTCACT TTCTCCAAAA GAAGAAAGGG TCTCATCAAG AAAGCTAAAG AACTCGCTAT TCTCTGCGAC GCCGAGGTCT GTCTCATCAT TTTCTCCAGT ACCGACAAGC TCTATGACTT TGCCAGCTCC AGTGTGAAAT CTACTATTGA ACGATTCAAT ACGACCAAGA TGGAGCAGCA ACAACTACTC AACCCTGCAT CAGAAGTTAA GTTTTGGCAG AGAGAGGCTG AAACTCTAAG GCAAGAATTG CACTCGCTGC AAGAAAATCA TCGGCACCTA ACGGGAGAGC AATTAAATGG TTTGAGCGTT AAGGAGTTAC GCAATCTCGA GAGCCAACTT GAAATGAGTT TACGTGGAAT TCGTATGAAA AGAGAACATA TTTTGACCAA TGAAATCAAA GAACTAACCA GAAAGAGGAG TCTTCTTCAT CATGAAAACC TCGAGATATC GAGAAAAGTG CAAAGGATTC ATCAAGAAAA TGTCGAACTA TACAAGCAGG TTTATGCAAC GTCAAACACA AACGGATTGG GACACCATGA GCTAGTGGAT GGAGCCAATG AATCCCTTGT AGAGGTTAGG CTGCAGCTAA GCCAGCCTGA GCAGTCCCAT TATGAGACTT CTTCAAACAG CTAA 
Length684
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1021791.. 1024043
Download Sequence
A.thaliana
AGI-codeAT2G22630.1
DescriptionAGAMOUS-like 17
TAIR curator summaryEncodes a MADs domain containing protein involved in promoting flowering. Loss of function mutations show delayed flowering in long days and reduced levels of LFY and AP1 expression.
Alias[AGL17][AGAMOUS-like 17]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg946972 Protein of unknown function (DUF295)
6.63325 Ahg475244 AGAMOUS-like-56
7.74597 Ahg929348
7.93725 Ahg916654
40 Ahg313108 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
44.4972 Ahg925736 type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein
44.6318 Ahg931891
52.0481 Ahg471005
57.0614 Ahg932660
58.7878 Ahg353523 ZIP metal ion transporter family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression