Detail



ID : Ahg313509

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313509|fgenesh1_pm.C_scaffold_1002289
Sequence
ATGGCGAGCG GATGTATGGA TGTGGTTCTT CTTGCTGTTT CTTGGGTGAT TCTGGCTGTG TTAGCCAATT CAAAAGGATT CAATCTCCAC TGCAACAACC TCAATAAGAC AGTCCTAGAG CTTCCTATGT CCGGAACATT TCTTGTTGAT AGAATCGACT ACTCAAAGCA GCAAATTTCT ATCAGCGACC CTGAAGACTG TATGGTCAAA AGGCTTTTAA CCTTCAATAC TTCAGGATCT CCTTTCTCTA ATGGCTTGAG TACTGTCTAT TACACGTTCT TGACCTGTCC GAATGAGGTC GTGAGGCTGT CTTGGTATCC GCGCATCCGT TGCCTAAGCA ATTCTACCTC CACCTTCTTT TCCACGTCTA ATATGTCACT TGCAAATTCA ATGCTGCCTT CTTGCCAGAT CGTGAAGAGA CTAGCTGTTC CGGTAAGCGT GTTTTATGAA AATGTGCTAA CTCATGAGAA AGGATTCTCT GATTGGATCA ACTATGTAAA CCTTTTGCTG GAATGGAGCT CGCCAAATTG CACGGGTTGT GAAAAGAAGT CCTTGAGATG TGGTTTCAAG AACAAGGCCT CCCTCGAAGT CAAATGCTTC GCTGATCCAC CCGGAATCAC CATCTTCACT ACTTGTATTG TTATGCCCAT TTGCAATTCA GAGAGGTTTG TCTTTCAGAG AAGACAAAAT GCTGCTATCG CAGACACAGC CCTAACGCAG CAGCCAAGAG GGGATGTGGT CACTACAGGT CTTGACCAGT CTACAATAGA GTCATACAAG AAAGTGGAGT TAGGAGAAAG TAGAAGGCTT CCGGGTACTA ATGGTATCAT CTGTCCCATT TGTTTATCAG AATATGCTAG CAAAGAGACT GTACGGTGCA TGCCAGAATG TGAACACTGT TTCCACGTCG AATGTATCGA TGCATGGCTC AAGATTCATA ATTCATGTCC TGTTTGTCGT AACTCACGCT CGTAA 
Length975
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11693290.. 11695418
Download Sequence
A.thaliana
AGI-codeAT1G28040.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.4936 Ahg320621
35.4542 Ahg950383 Auxin efflux carrier family protein
48.8365 Ahg939599
49.5984 Ahg337040
50.0799 Ahg945855 LOB domain-containing protein 32
55.4797 Ahg324506 expansin B5
59.7495 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
75.2994 Ahg476726 SKU5 similar 18
77.5887 Ahg478218 Transducin/WD40 repeat-like superfamily protein
77.923 Ahg485009
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression