Detail



ID : Ahg478218

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478218|fgenesh2_kg.3__919__AT3G09080.1
Sequence
ATGAAGCTAA GCCAGAAATT AAAGAAGCCT AGTTCATCCA CCAAGCTAAT TCTACAAGAG ATCATCGGTT TGACGACAAC AAACGCCAAT GGATTGGCAT CAGTTACTTG CAGCTCGAAA TGTGTTTACT TGGCGGGATG TGTTGTGGTA GTCTACGATG TAGGTTCTTT CACTCAATCG CATCTTGTTG TATCTCATCG TATGCCTAAG CCTTTGAGCT GTGTTGCGGT TTCGCAGAAT GGGCGATTTG TAGCTGCTGG AGAGAGGACA CGTTCAAGTA AAGTAGGATC TTTGGCATTT CATGGAAAGC AAACTGATAA TGGTTTTCAA AAAGGAAACT CGTTTGTGTC AGTGGTATCA ATCAATAGAG TGAACTCTAG TGGAATTGAC GAACAAAGTG ACGAATTTAT CTCAATATAC GCTCTCACAG AAGCAGGTGT AGGTGTTCTA ATGCTCATGA GTTATGGGAT GTTAATCAAC AAGTCGGTGG ATTTGAAGGT TGAAAAATGT TTTGCTCTAT CTGCATCCAG TGGATTGATA GCCTGCGCTT GCAGCAAGGG AATGGTCCAG CTATTTACGC CTGAAACTTT AGATTATGCT GGCACAATAC AATTTTCAGA TGCTAAAAGC AGCAACACTG AAAATCAGTC TCATTCAGCA GAACTCAAAA ATACAGAATC TCCGCCTGTT ATTTTTCCGG ACGCAGTTGC TTGCCAGTTT TCTACCAAAG ATAAGCTCGT TGTCATCTAT GGGGATCGTA GTCTCTATGT TTGGGATGTG AACGATGTGA ACAAGCCTAC TAGGTTCTCG ATGATGATAT CACATTCTGC CGGAATTCGG GATATCAAAA ACCTCTCTTG TGGAAATTTG CACAGTCCAA CAGCTGCATG TGTAGCTAGG GGATGCAGTG AAGGGGTTTC CTTCACTACA TGTTCTGAAG ATGGAACCAT CAGGTTGTGG GATCTTGCTT TTGAAGTGGG TCCAGCAGCC AACGCAAGCA GTAATCCCTC AGAATCTTCC ACACAAGGGA TTATGCATTT AGCTAGCGCT GGAATTTTTG AACGTGATCT CGTTGAGACA TGTGGTAGCA AATTTGGTTT CCGAGCACTG GTAGTAAGTG AAGATGGAAA GTACTTAGCA GCTGGGGACT GTGGAGGGAA CCTTCATATA TATGACCTAC AAGAATCAGA ATATACATGC TTTACGGATG CTCATGAAGC AGAAATTCAG TCATTGAGCT TCAGCTCTCC TGGACTGAAA GACGTTGATT CTGAAAATGC CTCAAGCAGC GATTTCTTGC TTGTTTCTGG TGGGAAGGGC CGAGCGATCC ACATTTATGA TGTCAAAAGG AACTTTGATC CCGTTGGAAG TGTTTGTGGT TCAGCTGCTG TAACTTCTGT TAAATTTGCA TGTAATGGCC AGAAAATGTT AACTTCTGGT GCAGATAGGT TGCAGCTGTT TGACGTTGTC AGAAAAGCAA GTAGTGTGCG TCTTTCACCT TCTCATCCTA AAACTCTCTC TCATGGAACC ATCTATGATG TGGTTGTAGA TCCAACATCA GGACTTGTTG TCACAGTGGG ACAGGATAAG AAGATAAACA TATTCGACAT AGGCAGTGGA AAGCTTGTTA GATCATTCAA GCAAGACAGA GACCATGGAG ATCCCTTAAA GGTCATTTTG GACCCAAGCT ACAGCTACTT AGTATGCTCC TACTCTAACA GGACAATCTG CTTTGTCGAT TTCGTCACCG GAGAGTTGGT TGCTCAGGCC ACAGGACATG GTGAAGCTGT GACTGGTGTT ATTTTCCTAC CTGATTGCAA ACATATCATT TCAGTTGCAA GTGACGGCTG TATTTTTGTC TGGAAACTTC CTCTGCGAAT GGCTACTCGT ATTATACAGG CAGTAAATGA AAATGGCAGG TTAACTGTGG CCCAACTTGA AAAGTTCAAG CAAATTGCGG TTGATTTGGA GGAAGACAAT CCAAAAGATG CATCATGTTC TGCAAACTAT AAGCCAGTAG AAGAGAACGC AGATCAGATG CAGCAGCAAC GCTCCCCATG GACATCCTCA TTTAAGTTCA GCGTTTCTCG ACTTCCTAAG TGGGCTCAAG CTAAAGTGGA AACATCTGAT ATTGCTACCA ATTGTCAGGA TTCCATTTCA AACCAGAAAC ATGAAGATAA AAGTCTGGCA AATACTGTTG TTGACTGTGC TGAAGAATGC TCTTCTGTAA ATCTTGATTG CCAAACTCCC AAACAAGGTT CAAAAGCCGA AAATTCATGC CTTGGAAGTC TTTCCAAAAG CTCCAGCGAT ACTGAAACTT CAGTCCTTCA AAGAGATGAT CCTAGCCACA AGAAAGAAAA AACCCGTTGG AACACTATCT ACAACGTGTG TTTGGATCTT CTAAATTCTC CAAACATCCA AGCACCTTTC ATTATACAAC AGAAACCTGA GAATTTCTGC ACCAAACATT CTGCCGGGCA TGGGGGCATG CTCAAGCAGT TTGATAACAG TTTGTCAATG ATAGACGAGG TTGAGGCCGA AAAATCATCG CAGCAAAGAA GATATTCTTC CCAGTTTTTC CTAAGAAGAG ACTACATCGG CGGAAGCAAA CAATTTATGC GTACGCCCTC CCAGAAATCA GGGTACAAGA CTTTGAGGTC GATCCAAGAA CATCTCCCTC TTGATACGGT GAAAGATCAA TCTTCACATA GTTCAGAAGA ACATCCTGAA CAGGACAAGA CGTCTTCAGA AGTATTCCAT GATACACTTG CAGACGATTC ACTTCAAGAA AGGATAACTT CCTGCCGTCA AGCATTACAC GGTTTAAACG CTGCTGCTGC GGTTTTCGTC CAGTCAATGT CGGAATTATC TACAGCTTCT CCCCGAGATC AAATCTCAGG TGAACTTAGA GATCAGTTGT TTGATGAAGC AGCTCTGATG ATTCCAAAAT TGTCTCATAA AGTTAATGAA GTTGTTGCCA AGATAATGCC TGCGCACAAA AATAGAAACA GTGATAGAAT GTTCTCCAAT TAG 
Length3033
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3379929.. 3385484
Download Sequence
A.thaliana
AGI-codeAT3G09080.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
36.6879 Ahg475700 DOMAIN OF UNKNOWN FUNCTION 724 7
38.0789 Ahg904577 Uncharacterised protein family (UPF0497)
52.4595 Ahg485821 alpha/beta-Hydrolases superfamily protein
70.5833 Ahg921128
77.5887 Ahg313509 RING/U-box superfamily protein
88.9494 Ahg924832
91.766 Ahg492311 root hair specific 15
99.7998 Ahg916302
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression