Detail


ID : Ahg314206

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314206|fgenesh1_pm.C_scaffold_1002986
Sequence
ATGACGAACA TGTCCAATCT TCCAAGGGAT TTGGGTAAGG AGTACCTTGA TGATCAAGCA AAAGTAGAAG CAAAGAAAAG AGAATTTCTG GTGGTCATGA TGATGGATTT TAGGGTTTAT TTGATGCGCG TCAATCTTCA CAATGACGTT GAGTCATGTA TAAAGCGTGA AGGTGAACTT TTTAGTTTAG GCGATGAAGT CGATGTATCT CTAAGTCTTT CACTGCGACG GGTAGTGGTT TGGAACCCGT ATTGGGGGCA AACCCGGTGG ATCGAGCCTA CACATGATTT CCACAAATTG TACTCGTATG CTCTTGGATA CGAGAAGCGC AGCAAATCAT GCCGCAGCTA CAAAATCTTG AGATTTGTTG ATTTTTTCTC CTACTATGTT GAGTTTAAAA TCTACGATAT TAACTCTGAT TCATGGAGGG TTCTTGATAT CAGTCCATAC TGTCAGATAC ACTCTGATAG TCGTGGCGTC TCTGTCAAGA GAAATACGTA CTGGTTTGTT AGAAACAGGC GACGTTTCTT AGTCTGTTTT AATTTCACAA GAGAGAGTTT TGGGCGGTGT TTGCGTCTGC TGTTTGAGTT TTCTACTTCA TATACTGTCA GTCTATCTAG TTGCTCTTAT ACATCACAGA TGCAGATCTG GGTAACAACG AAAATTGAGC CCAACTCGGT GTCGTGGAAC AGTAAGATAT TCTTAGCGGT GGATATGAAC CCACTTACTG CTCTTTCCTT TCAGTTAGAG GTTGGAGCTG CGAGTTTCTT TATTGACGAG GAAAAGAAAG TTGCTGTGGT TTTTGATAAA GGAAAAAAAG ATTTAGTGTC CACTCACAAC ATAGCTTATA TCGTTGGAGT GGATGGAATT TTGGAAGAAG TGGATCTTGG AATATCCGCA AACAAATTTT GTTATCCACT TGTGTGCTCT TATGTTCCGA GTTTAGTGCA GCTTTAG
Length957
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22790727.. 22791810
Download Sequence
A.thaliana
AGI-codeAT3G24580.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.4097 Ahg942188 Plant self-incompatibility protein S1 family
12.9615 Ahg349127
17.4929 Ahg485511 lipid transfer protein 12
20.0998 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
23.1301 Ahg932378 geranylgeranyl pyrophosphate synthase 2
25.923 Ahg922349 VQ motif-containing protein-related
31.5595 Ahg489695 Protein kinase superfamily protein
36 Ahg898182 cell wall invertase 2
36.4692 Ahg471161 zinc finger protein 5
44.1928 Ahg952186 Protein of unknown function (DUF626)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression