Detail


ID : Ahg932378

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932378|scaffold_400366.1
Sequence
TTTTGATTTG ATTAGATGAA ACATGGAACC ACAAACTCTT TTTCTCTATC TCTCACTTCT CATTCTCTCC CTAAACTTCT TCTTCACGAA TCTTAAACCG AGGCTAGTCC GCCTCTTCCA GCCTTCTTTG GAATCTCGTG TCAAGACCGC CCTATTATCC CGAAAAGAAG TAGCCGAGTT TCTTGATTCT CCCATTGTAG AAGACGAAAA AGCGGAAGAA GAAGAAGAAG ATATCGTTTC AAATGCCAAC TTCACGTTTG AATTTGATCC ATACATGATA AGCAAAGCCG AATCAGTGAA CAAAGCTCTA GACGAAGCCA TTCCAGTCGG AGAGCCACTC AAGATCCACG AAGCCATGCG TTACGCGATT CTTGCGGCTG GAAAACGTGT TAGGCCAATA CTCTGTCTTG CTTCTTGCGA GCTAGTAGGC GGTCAAGAAA ACGCCGCAAT GCCTGCGGCT TGTGCGGTTG AGATGATCCA CACGATGTCT CTAATCAAAG ACGATTTGCC TTGTATGGAC AACGATGATT TGCGTCGTGG AAAGCCCACG ACGCATAAAG TCTACGGTGA GGGAGTTGCC ATTCTCTCTG GTGGGGCTCT CTTGTCTCTT GCCTTCGAGC ACATGACGAC GGCTGAGATA TCTTCGGAGA GAATGGTTTG GGCAGTGAGA GAATTGGCTA GGTCTATTGG TACAAGAGGT TTAGTCGCGG GACAAGCGAT GGATATAAGC AGTGAAGGTT TGGACTTAAA CGAAGTCGGA TTAGAGCATT TGGAGTTTAT CCATGTCCAT AAAACCGCGG TTTTGTTGGA AACTGCCGCG GTTCTTGGAG CCATTATTGG TGGTGGATCT GATGAAGAGA TTGAAAGTGT GAGAAAGTTT GCAAGGTGCA TTGGATTGTT GTTTCAGGTG GTGGATGATA TTTTGGACGA GACAAAGTCA TCGGAGGAAT TGGGAAAAAC CGCCGGAAAA GATCAGCTCA CCGGAAAGCT AACGTATCCG AAGTTGATGG GGTTGGAGAA ATCGAAAGAA TTTGTTAAGA GATTGACGAA AGATGCACGG CAACATCTTC AAGGGTTTAG TTCTGAAAAG GTTGCTCCTT TAGTAGCTCT TACTACTTTT ATTGCTAATA GAAATAAGTG ATTATTTGTT TTATTTGTGT G
Length1161
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1953122.. 1954282
Download Sequence
A.thaliana
AGI-codeAT2G23800.1
Descriptiongeranylgeranyl pyrophosphate synthase 2
TAIR curator summaryencodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase
Alias[GGPS2][GGPS5][geranylgeranyl pyrophosphate synthase 2][GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg493795 GDSL-like Lipase/Acylhydrolase superfamily protein
8.94427 Ahg333411
9.94987 Ahg947513
11.1355 Ahg948576 F-box/RNI-like/FBD-like domains-containing protein
12.8452 Ahg490561 Plant invertase/pectin methylesterase inhibitor superfamily protein
14.4914 Ahg928282
19.3391 Ahg934882 Protein kinase superfamily protein
22.2486 Ahg896827 transposable element gene
22.6053 Ahg926138
23.1301 Ahg314206 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression