Detail



ID : Ahg315176

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315176|fgenesh1_pm.C_scaffold_2000209
Sequence
ATGGTGTCAT CGCCACGGAG TGAATCTACC TCCGGCAACA ACAATACAAC CACTCCCGAT GGAATCAGCG GCAAGAGAAC TCCTTCCTCT TCTTCTTCGG AAGATAAATC TCCTTCATCC AAACGCCCAA AGTTGGGAGA TGGCGGCGGC GCTTCTATCG AGAACAGTAA ACCTCCAACC TCCGGAGAAG CCAAGATTGC GGCGGAACCA CCACCACCTC CTGTTGCGGA AGGCTCAACA CCAGATAGTT CTTTTTCCGG ATGGAAATAT CAACACAGTA CATTTAAGAC TCCATGGTGT CGATTGCTAT CAGAGTCTGC ACAGCATCCA AACGTTAACA TTTCTACATC GTCCTTCACT ATTGGTTCTT GTCTAACCTC CAACCTCACA TTAAAAGATC GGAATCTTGG TGCATTATTG TGCAAGATCA CAAGAATTCA GCGCAATGGC AATGTTGTAG CGGTTCTAGA TATCACAGGA ACCGGGGGAC CTGTGCGGAT AAATGGAGCA CTTGCCAACA AGAATGTCAG CCATGTCCTA CACTCTGGTG ACGAATTGAT GTCTAAAGTT GCAGTCAAAT CTGGTGGGGA ACAGGTTCCT GCAGCAAAAT TTCTACAGTT AGAGAGAGAG GCAAGAGATC CATCAACTGT TTCGATTTTG GCATCGCTTG AAATCTCGCG TGAGAATCCT GCTACTTCTG GCGTCCAAGA AGGCGCAGAG CTTGAATTTG ACAATCAAAG TAATAAAGCT GCAGACAGTG GAGTAGTCAG CAGCCACAAC CAAGATTCCA AAATGGAGAA AAACGAGGTG ACAAGGAGGC CAGAACAAGC TGCAAGATTC AGGAAATATA TTCAAGCTGG AATTGTTGAA GGCGAAAGAT TGAAATTTTC ATTCGAAAAT TTTCCTTATT ATTTGAGTGA GAATACAAAG AACGTCTTAC TAGCTGTTTC ACATATACAT CTGAACAAAG AGAATACAGG ATATGCCCTA TATGCCTCCG ACTTTACCAC TTTGAATCCA AGGATATTGC TTTCTGGTCC TGCAGGAACT GAAATATACC AAGAGATATT AGCTAAAGCA CTTGCCAAAT ACTTCAAGGC GAAATTGCTA ATTTTTGACG GCCATCCAAT TTTGGGGGTT ATGACTGCTG AAGAATTTGA GTCACTGATG AATGGACCTG CTTCTAAAGA GCTCATTGAC CGAGGGAAAA GCTTGGATTT GTCAGCAGGT GAAGGAGGTT CATCTAGCCC TTCTCCTGCT ACTTCTCCCG GTCCAGACTC ACAGCCTAAG TTTGAGCCGG AGACTTTACC TTGTTCATTT GGAACTCCAA TTTCTGGTTT ACTGATACTT CATTGGGAAA AAACACTTGC AGGTGACAGG GTAAGATTCA TAGGTGATGA GTTGTGTTCG GGGCTACCTA CCTCAAGGGG ACCACCTTAT GGGGTTAGAG GGAAAGTACT TTTAGTATTT GATGAGAATC CTTCAGCTAA AGTGGGTGTT AGATTTGAGA ATCCAGTAGT TGATGGCGTT GATCTTGGTG AACTGTGTGA AATGGGACAT GGGTTCTTCT GCAGTGCTAC TGATCTTCAG TTTGAAAGCT CGGGTTCTGA GGATCTAAAT GAATTACTTG TTAGCCAATT GTTTGAGGTT GCCCATGATG AGAGCAGAAC TTGTCCGGTT ATTCTATTCC TGAAAGATGA TGAGGAAGTT TTTGTTGGAA ATTCCGATTT CTGCTCTGCA TTCAAAAGCA AAGTTGAAGA AATCCCAGAT AACGTAATTG TGATCTGTTC ACAGACACAC TCTGATAATC ACAAGGAGAA GGATATTGGA CTTCTAACGA ATCTCTTTGG GAATAAAGTT ACCATTTACG AGCCACAGGG TGAGGATCTT CTTAAATCTT GGAAGTATCA TTTGGATCGT GATGCTGAGA CTTTGAAAAC AAAGGCTAAT CGCAATCACT TGCGCATGGT GTTGGGACGA TTTGGTATAG ATTGTGAAGG CATTGAGACG CTGTGCATGA AGGATCTCAC ACTTCAAAGT GACAGTGCAG AAAAGATCAT TGGATGGGCT CTTAGTCACC ATATAAAGTG TAATCCTGAT GCTGATCCAG ATGTTAGTGT CACTTTGTCT CTTGATAGCT TAAAATGTGG AATAGAACTC TTTCAGGCTC TTGTAAATGA AACTAAGAGC CCGAAGAAGT CTCTCAAGGA CATTGTGACA GAAGTTGATT TTGAGATAAG TGATGTTATT CCGCCCAGTG ACATTGGTGT TACATTTGAT GACATTGGGG CACTTGAGAA TGTCAAAGAC ACTTTAAAGG AATTGGTTAT GCTTCCTTTA CAACGGCCTG AACTTTTCTG CCAAGGGCAA TTAACAACGC CTTGTAAAGG AATTCTCTTA TTTGGACCTG CTGGAACTGG AAAGACCATG CTTGCAAAGG CATTGGCAAC GGAAGCTGGT GCTAATTTGA TCAACATCTC AATGTCAAGG TGGTTTAGTG AGGGTGAGAA ATATGTCAAA GCTGTCTTTT CGTTGGCCAG TAAAATCTCC CCTAGCATTA TCTTTATGGA CAAGGTGGAC AGCATGCTAT TCCAAGATCA GAAGACGGCA AATGAGTTCA TAATAAATTG GGACGGTCTG AGGACAAACG AAAAGGAACA TGTTCTGGTT CTTGCATCCA CAAATAGACC TTTTGACCTT GATGAGGCTG TCATTAGAAG GTTGCCTCAT AGGTTGATGG TGGGACTACC AGATGCTCTG AGTAGAGCAA AGATATTGAA GGTTATACTT GCAAAAGAAG ACTTGTCCCC TGATTTTGAT ATCGATGCAG TTGCTAGTAT GACTAATGGA TATTCTGGAA ACGATCTTAA GAATCTATGT GTTACTGCTG CCCGCTGTCG AATCAAGGAG ATAGTGGAGA AGGAAAAAAG TGAGCGAGAT GCTGCTCTGG CTGAAGGAAG AGTTCCTCCA GCACGAAGTG GAAGTTCTGA TATCCGAGCT TTAAACATAG AGGATTTCAG AAACGCACTT GAGCTGGTGA GTATGAGCGT CTCATCAGAG TCTGTGAACA TGACAGCGCT TCGAAAATGG AACGAACATT ACGGGGAAGG TGGATCCAGT AAATGGAACG AACATTACAC GTAG 
Length3144
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1783279.. 1789969
Download Sequence
A.thaliana
AGI-codeAT1G62130.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.2288 Virus1737
28.2843 Ahg949089
34.9428 Ahg923562 Membrane trafficking VPS53 family protein
35.6651 Ahg925046
39.4715 Virus3111
56.3383 Ahg909031 tetraspanin 17
66.1135 Virus3066
69.8856 Virus3962
77.0714 Virus2942
81.2465 Ahg935500 AT-hook motif nuclear-localized protein 22
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression