Detail



ID : Ahg317768

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317768|fgenesh1_pm.C_scaffold_3000784
Sequence
ATGGGATTTT ACGGAGGCGG CAACGACGGT GGAAGCATGA CATCGGGTCG CCGTGAATTA ACCGGAATTG ATTCTTTCGG CATCGGGAAA GTATTAGCTG TATATTTTAA GGACAACGAG AACTTGGCCA TTGATGAGGA TAAGTTGCTG CTCACGGCGG AGCTTATCCG CGTATTCTCC ACCTCACCTG GTAGAGACCT AGTTTCTCAG GTGAATGACG AAGGTGGTGG TTCCTTCTCT TTGTCGCTTG ATCTCCAACA ATTCAAGAAA ATATCCGATA TCGAGAACTT TTTCATAAAT CTCGAGGATA ATCCCAAAGG AGTTATCCCA TGTATGAATG CTGCTGTTCA CAAGCTTCTT TTAGGTCAAT GGGAGACTAA TGAGTTTGAG AATGGCATGA AGATCAGTGT TCGTCTGCAT AATTATCCTG AATCTTCTAT CTCCCTGAAA AACCTCAGAG CGGCTTATAT TGGAAAGCTT GTAACAGTTC ATGGCACTGT TGTTAAAGTT AGTACTGTGA AGCCCCTTGT CACACAGATG GCTTTTGACT GTGGAAAGTG CAAAACTAGC ATAACCCGGG AATTTTCTGA TGGAAAGTTT TCACCTCCAC TAAAATGTGA CGCCCATGGA TGCAAGTCCA AAACGTTTAC TCCAATCCGG TCCTCTGCTC AGACAATTGA CTTTCAGAAA ATCAGGGTAC AGGAGTTGCA AAAGCCTGAA GACCACGAAG AAGGACGGGT ACCCCGAACT GTAGAATGTG AGCTGATGGA AGACCTTGTG GACACATGTA TCCCTGGTGA TGTGGTGACA GTTACAGGGA TTATAGGAGT AATTAATAAT TACATGGATA TTGGGGGAGG GAAATCGAAG ACCAAGAATC AAGGATTTTA CTTTTTGTTT ATCGAGGCAG TTTCAGTGAA AAACACCAAG CGACAATCTG CATTTGAGAA CTCAGAAGAC TCTAGTAGCA GTGCCCAGTC TGCAGATGTT GGTGACTTAT ATTCATTCTC ACAGAGAGAC TTGGAATTTA TTGTGAAGTT CAAAGAAGAA TATGGTTCTG ATACATTCCG TCGCATACTT CATTCAGTCT GCCCGTCTAT TTATGGCCAT GAAATTGTCA AAGCTGGGAT AACACTATCT CTTTTTGGAG GTGTAAGGAA GCACTCCATG GATCGGAACA AAGTTCCAGT CAGAGGAGAC ATTCATGTCA TTATTGTTGG TGACCCTGGA TTGGGCAAAA GTCAGCTCTT GCAAGCAGCA GCTGCCATTT CCCCGCGTGG CATTTATGTA TGTGGTAATG CGACGACTAA AGCAGGGCTC ACCGTTGCTG TAGTGAAAGA TTCCATGACA AATGACTATG CGTTTGAGGC TGGTGCCATG GTACTCGCAG ATGGTGGGTT GTGCTGTATT GATGAGTTTG ATAAAATGAC CACCGAGCAT CAGGCGTTGC TAGAAGCAAT GGAACAACAA TGTGTCTCTG TTGCAAAGGC TGGGCTTGTA GCTAGTCTAT CAGCTCGAAC TTCTGTTATA GCAGCAGCAA ATCCTGTTGG TGGCCACTAC AACCGTGCCA AAACTGTAAA CGAAAACTTA AAAATGAGTG CTGCCCTTCT CTCACGGTTT GATTTAGTTT TCATATTACT TGACAAACCT GATGAGCTAC TCGACAAGCA AGTCTCAGAA CATATTATGT CGCATCACAG AATGCTGGAT ATGCAAACAT GCATGCAAAA GGGAATTCTC TACTTTCAAG ACTGCAGTTG GACTCTAAGA AAGATGACGA CTTTTCTCCA GTTCCTGGCC AATTGCTTAG GAAATATATT TCTTATGCAC GGACTTTTGA TGTCAAAGGA AGCTGGAGAG ATCATACAGA AGTTTTACTT GAAGCTGAGA GACCATAACA CATCTGCTGA TTCCACACCA ATAACAGCAA GACAACTGGA AAGTTTGGTT AGGCTTGCGC AAGCTAGAGC TCGGGTTGAT TTAAGGGAAG AAATAACAGT CCAAGACGCC ATGGATGTGG TTGAAATAAT GAAAGAATCG TTGTATGATA AGCTTATAGA TGAACATGGG ATTGTGGATT TTGGTCGGAG TGGAGGAATG AGTCAACAAA AGGAGGCCAA ACGTTTCTTA AGTGCTCTTG ATAAGCAATC AGAGCTGCAG CAGAAAGATT GTTTTTCTGT TTCTGAGATG TATAGTTTAG CTGATAGAAT CGGCCTACGA GTTCCAGACA TCGATACTTT CCTAGAGAAT CTGAATATTG CCGGATATTT ACTCAAGAAG GGACCAAAGA CTTACCAGGT CCTCTCCTCA TCTTATTCCC GGAGTCAGTC ATCCAGGTCA AGATGA 
Length2346
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3593021.. 3597979
Download Sequence
A.thaliana
AGI-codeAT3G09660.1
Descriptionminichromosome maintenance 8
TAIR curator summary
Alias[AtMCM8][MCM8][minichromosome maintenance 8]
Gene coexpression
MR
MR Locus Description
22.1359 Ahg486733 HCO3- transporter family
37.2961 Ahg332471 NAC-domain protein 101
39.95 Ahg907575
48.0416 Ahg320730 Galactose oxidase/kelch repeat superfamily protein
69.5845 Ahg895772 Plant invertase/pectin methylesterase inhibitor superfamily
73.7564 Ahg481047 Cysteine/Histidine-rich C1 domain family protein
79.599 Ahg489952 cytokinin response factor 1
93.2416 Ahg478184 Pentatricopeptide repeat (PPR) superfamily protein
98.6712 Ahg491802
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression