Detail



ID : Ahg332471

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332471|fgenesh1_pm.C_scaffold_8001814
Sequence
ATGGAGAGTC TCGTACACAT TCCTCCCGGT TATCGATTCC ATCCGACCGA TGAAGAACTC GTTGACTATT ATCTCAAGAA CAAAGTTGCA TTCCCGGGAA TGCAAGTTGA CGTTATCAAA GATGTTGATC TCTACAAAAT TGAGCCATGG GACATTCAAG AGTTATGTGG AAGAGGGACA GGAGAAGAGA GGGAATGGTA TTTCTTTAGC CACAAGGACA AGAAATACCC AACTGGGACA CGAACCAATA GAGCAACTGG CTCCGGATTT TGGAAAGCAA CGGGTCGAGA CAAGGCCATA TACTCGAAGC AAGAGCTTGT TGGTATGAGG AAGACTCTTG TGTTTTACAA AGGTAGGGCC CCGAATGGTC AGAAATCCGA TTGGATAATG CACGAATACC GTCTCGAGAC CGATGAAAAT GGACCACCTC ATGAGGAAGG ATGGGTGGTT TGCCGCGCTT TCAAGAAGAA ACTAACCACA ATGAATTACA ACAATCCAAG AACAATGATT GGATCATCAT CTGGCCAAGA ATCTAATTGG TTCGCGCAGC AAATGGATGT GTCTAATGGT AATTACTATC ATCTTCCTGA TCTAGAGAGT CCAAGAATGT TTCAAGGCTC ATCATCATCA TCAATATCAT CATTACACCA GAATGATCAA GACCCTTATG GTGTCGTACT AAGCACTATT AACGCAAATT CTGCAACCAC AATAATGCAA CGAGATGATG GTCATGTGAT TACCAATGAT GATGATCACA TGATCATGAT GAACACAAGT ACTGGTGATC ATCATCAATC AGGATTACTA GTCAATGATG ATCATAATGA TCAAGTAATG GATTGGCAAA CGCTTGATAA GTTTGTTGCT TCGCAGCTAA TCATGAGCCA AGAAGAGGAA GAAGTTAACA AAGATCCATC AGATAATTCT TCGAATGAAA CATTTCATCA ACTCTCTGAA GAGCAAGCTG CAACAATGGT TTCGATGAAT GCCTCTTCCT CTTCTTCTCC ATGTTCCTTC TACTCTTGGG CTCAAAATAC ACACACGTAA 
Length1050
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19233489.. 19234659
Download Sequence
A.thaliana
AGI-codeAT5G62380.1
DescriptionNAC-domain protein 101
TAIR curator summaryEncodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.
Alias[ANAC101][NAC101][VND6][NAC-domain protein 101][VASCULAR-RELATED NAC-DOMAIN 6]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg906687 GATA transcription factor 20
19.7484 Ahg355070
33.6749 Ahg937669
36.4417 Virus3385
37.2961 Ahg317768 minichromosome maintenance 8
47.3498 Ahg476654
55.3173 Virus0517
62.849 Ahg487097 laccase 11
76.8765 Ahg933660 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
87.1206 Virus0395
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression