Detail



ID : Ahg317949

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317949|fgenesh1_pm.C_scaffold_3000965
Sequence
ATGGATTTGA ATGCTCAAGA GAAGAAAGCA GGGTTCTTTC AAAGGCTTAA GGAATTCCCT AGGAAGCTCA AAGACGGTGT CACCAAACGC ATGAAGAATG TGAAAAAGTT TGGGAAAGAT GATCCAAGAC GAATCATTCA CTCCATGAAA GTTGGAGTTG CTCTCACATT AGTATCATTG TTGTACTATG TGCGAGCACT CTACATCAGC TTCGGGGTCA CGGGTATGTG GGCGATACTT ACCGTAGTCG TGGTCTTCGA ATTCACTGTT GGTGGAACAC TTTCCAAAGG TTTAAACAGA GGTTTTGCGA CATTAATAGC AGGAGCCTTA GGGGTTGGGG CAGTACACCT TGCTCGTTTC TTTGGGCATC AAGGAGAGCC CATAGTTCTT GGGATCTTAG TGTTCTCACT AGGCGGAGCT GCAACATTTT CGCGGTTTTT CCCTAGGATC AAACATAGAT ATGACTACGG TGCCTTGATA TTCATACTCA CATTTAGTTT CGTTGCCATT TCGGGTTACC GTACAGATGA GATATTGATT ATGGCATACC AAAGGCTATC GACTATTCTT ATCGGTGGCA CGATCTGCAT CCTTGTGTCG ATTTTCATTT GTCCTGTATG GGCTGGCGAA GATCTTCACA AGATGATTGC TAACAACATA AACAAACTTG CTAAGTACCT AGAAGGTTTC GAGAGTGAAT ATTTTCAACC GGAGAAGATT TCAAAGGAGA CAAACTCGTG TGTCCGAGAA TATAAGAGCA TTCTGACATC AAAAAGCACT GAAGATACTT TGGCGAATCT TGCTAGGTGG GAACCAGGGC ATGGCCGTTT CAGGTTACGG CATCCGTGGA AAAAGTACTT GAAAATTGCA GGTCTCGTTC GCCAATGTGC CTTCCATTTC GAAATCCTCA ATGGCTACGT TCTCTCTAAC GATAAGGCAC CACAAGAATT CGACAGTAAG TTTCAAGAGC CAATCACGAT TATGAACAGA GAAGTTGGTG AAGCCCTAAA AGCCATGGCC AAATCTATCA AGACAATGAG CAAAGACAGT GCTTGTGTGA ACTCACACAT TGACAACTCC AAAAAGGCCA TTGTAAACTT AAGGATTGCA CTCAAATCTT CTTATCCAGA CACAGAGAAA GATCTTTTGG AGATCATTCC CGGAGTCACA ATGGCATCAA TCCTGATCGA GGTTGTGAAT TGCGTCGAGA AGATCTCTGA GGCTGTCGAA GAATTCTCTG GTCTTGCACA TTTCAAAGAG ACTTTGGATC CAAAATTATC AGCGGAGATA GGACAACATC AGTTACTCCA CAGGGGAAGT GTAAAGCCGG TTCCAGATGG CGACAACGAG AAAGAAGACA ATAGCTCGTC GTCTCATGTT CTTATCCCTG TCCATGATGA AGAACAGCCA CCAACGGCCA CTGCGAAGAA CGTTTTGGGA GCAGAGAAGA CGAGAGTAGA TGTTGTGTGA 
Length1470
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4415696.. 4418085
Download Sequence
A.thaliana
AGI-codeAT3G11680.1
DescriptionAluminium activated malate transporter family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg935403
33.8231 Ahg951906 MATE efflux family protein
39.5727 Ahg928282
41.1096 Ahg921032
54.111 Ahg921122
56.6304 Ahg312221 Pectin lyase-like superfamily protein
58.9152 Ahg941002 Peroxidase superfamily protein
68.7023 Ahg951548 F-box family protein with a domain of unknown function (DUF295)
70.3207 Ahg475858
75.9078 Ahg933077
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression