Detail



ID : Ahg312221

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312221|fgenesh1_pm.C_scaffold_1001001
Sequence
ATGGCTTCTC TTTTCTTAAC ACTTTCACTT CTCTTTGCAG CTTTCTCTTC TTTTATTGTA GAGGCGGCTT ACGGTAATGG TTATACAATT CCCAAACTAT TACTAAATCC TATCGATTCT TGCTGGCGAA GAAACCCTAG TTGGGCGTTT AACCGTCGTT CTCTAGCCGA TTGCGCGGTA GGGTTTGGGA AATCAGCGGT TGGGGGGAAA TACGGGTCGA TCTACGTGGT TACAAACCCA TCAGACGACC CTGAAAACCC TAGACCAGGA ACTCTTAGAC ACGCCGTGAT CCAATCTAAA CCACTATGGA TCACATTCGC ACGTGACATG GTCATAGTGT TGCGAAACGA ACTCATCATG AACAGCTACA AGACGATCGA TGGAAGAGGG GCAAAAGTGG AAATTGCCTA TGGACCATGC ATAACGATCC AACATGTGAG CCATGTCATT ATACATGGGA TAAGTATCCA TGATTGTAAA CCGGGTAAGT CGGGTCGGGT TCGGAGCAGC CCGACTCATG TTGGCAGCCG GAAAGGATCG GATGGTGACG CAATAGCCAT TTTTGGTTCT TCACATATTT GGATTGATCA TTGTTACTTT TCTCGGTGTC AAGATGGTTT GATCGATGTA CTTCATGCTT CGACGGCCGT CACTATTTCT AATAACTACT TCACTCAGCA TGATAAAGTG ATGTTACTCG GACACAATGA CAATAATGTG GAAGATAAGA ACATGAGAGT TACAATTGCA TTCAACCATT TTGGACCGGG TCTTATTGAG AGAATGCCTA GAGTGCGAAG AGGGTATGCG CATGTAGCAA ACAATAGGTA CGAGAAGTGG CAAATGTATG CGATCGGAGG AAGTGCTGAT CCAACCATCT TTAGTGAAGG CAACTACTTC GTTGCTTCTG ATGACCCTAG CAAAAAACAG GTGACAAAAA GAATAGATAG TGGATATGAT TGGAGGAGAT GGAAATGGAG AACGTCCAAA GACGTTTTCA AGAATGGAGC TTACTTCGTG CCGTCTGGCT ACGGAACCGT AACGCCGTTG TACGGAAGAG CAGAGTGGTT TCCGGTGTCT CACGGCTCTC TCGTCCCTTC TCTTACTTCG TCCGCCGGTC CTCTCCATTG CTATTCCGGC AGAATTTGCT AA 
Length1152
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4573386.. 4574810
Download Sequence
A.thaliana
AGI-codeAT1G11920.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg948820 Integrase-type DNA-binding superfamily protein
2.23607 Ahg341831
5 Ahg485821 alpha/beta-Hydrolases superfamily protein
5.65685 Ahg484770 TAPETUM 1
5.83095 Ahg951906 MATE efflux family protein
6.7082 Ahg316907
7.74597 Ahg946420 RING/U-box superfamily protein
8.3666 Ahg473311 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
8.94427 Ahg891734
10.3923 Ahg948830 Uncharacterised conserved protein UCP015417, vWA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression