Detail



ID : Ahg481174

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481174|fgenesh2_kg.4__234__AT2G23030.1
Sequence
TCTAAAGATA TTTTGGAAGA GAAGATTCAT CAAAAAAAAA AAAAGATATT AAAGGACCAT TTTAAGGAAG TGAGAACAAA AAATGGAGAA GTATGAGATG GTGAAGGATT TGGGATTTGG TAATTTCGGT TTGGCTCGGC TTATGCGTAA TAAGCAAACA AACGAGCTTG TGGCTGTCAA ATTCATCGAT CGAGGCTATA AGATTGATGA GAACGTTGCA AGAGAAATAA TCAATCATAG AGCTCTCAAC CATCCCAATA TTGTTGTTCT AACTCCGACA CATCTTGGGA TTGTAATGGA GTACGCAGCT GGAGGAGAAC TATTTGATCG GATATCTAGC GCGGGTCGAT TTAGCGAAGC TGAGGCAAGA TATTTCTTTC AACAACTCAT CTGTGGAGTC CATTACTTAC ATGCCATGAA AATATGCCAC AGAGATCTGA AATTAGAAAA CACATTGCTT GATGGAAGCC CAGCACCACG TTTAAAAATT TGTGATTTTG GCTACTCAAA GTCTTCTGTT CTGCATTCCA ACCCAAAATC AACGGTGGGA ACTCCGGCAT ATATAGCACC GGAAGTTTTT TGTCGATCGG AATACGATGG AAAGTCAGTT GATGTGTGGT CTTGTGGAGT GGCACTCTAT GTTATGTTGG TAGGAGCTTA TCCTTTCGAA GACCCTAAAG ATCCTCGCAA TTTTCGAAAA ACTGTTCAGA AAATAATGGC TGTACAGTAC AAGATTCCAG GATATGTTCA CATATCAGAA GACTGCAGAA AGTTATTATC TCGTATATTT GTTGCCAATC CGTTACATAG AAGTACGCTT AAAGAGATTA AGAGTCATGC ATGGTTCCTA AAGAATTTGC CAAGAGAACT AAAGGAGTCA GCACAAGCTA TTTATTACCA AAGGAATGTT AATCTTATTA ACTTTTCTCC TCAAAGAGTA GAGGAGATTA TGAAGATAGT TGGTGAGGCA AGAACCATTC CAAACCTTTC TCGCCCGGTC GAATCGCTTG GACCAGGAAA GATAGATGAT GAAGAAGAAG AATATTTGGA TGCTAATGAT GAAGAATGGT ATGATGATTA CGCATAAACA ATAAAAATGT ATTTCATGTT GTCAAATTAT GAA 
Length1123
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1338626.. 1341433
Download Sequence
A.thaliana
AGI-codeAT2G23030.1
DescriptionSNF1-related protein kinase 2.9
TAIR curator summaryencodes a member of SNF1-related protein kinases (SnRK2)
Alias[SNRK2-9][SNRK2.9][SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9][SNF1-related protein kinase 2.9]
Gene coexpression
MR
MR Locus Description
16.6132 Ahg318329 Regulator of Vps4 activity in the MVB pathway protein
23.3238 Ahg359670
33.9117 Ahg481608 ECA1 gametogenesis related family protein
37.8814 Ahg937786
43.1856 Ahg923785
54.4977 Ahg912766 Zinc finger C-x8-C-x5-C-x3-H type family protein
69.0652 Ahg334698
69.1448 Ahg476164 similar to RCD one 3
71.8262 Ahg949344
85.9942 Ahg934692 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression