Detail



ID : Ahg318465

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318465|fgenesh1_pm.C_scaffold_3001481
Sequence
ATGGGTAGGA GAAGGAACAT TGGTTTTGAT AAAATTATAG AAGAACGGAA GATGTTGAGC TTTTTCAAGA TTTTTCAGAG TTCAGATCTA TCTTCTGAAT GCATGAGAGC GTTTTCTTAC AGCTTCATAA GTAGACTCTC AAGGAAAGAC TTCTCTTACA AGATGGTGAT AAGAGCGCAA TGGGGAAAGA CATGGCATCT AGAAATCTCC AAGAACCCGA GATACTACTA CATTGAGAGG CGTGGATGGG ATCAGTTTGT GAGTGACAAT GCTTTAGGAG AAAACGAGTT CATTACCTTC ACTCACAGAG GAAATATGGT CTTTCATGTC AACATCTACG AGCAGAATGG TGTAGAGATG CTCACACCTC GAAAATTCCA GACAATGGAT TCTTCTAGTG GGATCAAGAA AGAAGGAGAG AGTAGCTTCA AAGATGTGAA GAAGGAAGAG GAAACTGATG AATCCGCGGG ACGAGCTGAG TTCGTAGTTA GAAAGAGGAA GACTGAGGAA TCCAAATCAT CCAAGAAGAA GATGGAGAGA AAGAAAAAGA AGAGCAAGAG CAAGAGTAAG AGCAAAGAAG TGCTGAATGG TGTTCCAGAA TTCAAAATCA CCATAAGGAA ATCATACCTC AAGTTCCTGG CAATCCCAAA ACATTTTGTG GATGATCATA TCCCGAATAA GTCTAAGTTT TTCACGGTTC GTCACCCGAA TGGGATTGGT TCATGGAAGG TGCTCTGCTT GGTGAGGGAG ATTAGGACAA TCTTCTCAGG TGGATACTCA AAATTGGCAA GAGAGTATCC TTTAATGGTT GGTGACAAAT GCACCTTCAA GCTCATCAAA CCCTTCGAGT TTGTCCTTCT TACCTCCAAG AAGACCAGAG ATGAGATTGA TCACTACATG ATCGATTGA 
Length909
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6839327.. 6841395
Download Sequence
A.thaliana
AGI-codeAT3G17010.1
DescriptionAP2/B3-like transcriptional factor family protein
TAIR curator summarytranscriptional factor B3 family protein, contains Pfam profile PF02362: B3 DNA binding domain. Activated by AGAMOUS ina a cal-1, ap1-1 background. Expressed in stamen primordia, the placental region of developing carpels and the ovary.
Alias[REM22][REPRODUCTIVE MERISTEM 22]
Gene coexpression
MR
MR Locus Description
31 Ahg901222 homeobox-3
32.28 Ahg353664 Transcriptional factor B3 family protein
43.8862 Ahg483920 Signal transduction histidine kinase
46.551 Ahg903801 Transmembrane amino acid transporter family protein
48.6826 Ahg938233 plastocyanin-like domain-containing protein
65.0538 Ahg477911 NOD26-like intrinsic protein 7;1
65.6658 Ahg493503 O-Glycosyl hydrolases family 17 protein
76.7463 Ahg484455 AP2/B3-like transcriptional factor family protein
76.7659 Ahg949037 transposable element gene
77.9487 Ahg945083 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression