Detail



ID : Ahg318888

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318888|fgenesh1_pm.C_scaffold_3001904
Sequence
ATGAATTTGG AGGAACATTT ATCGTTAGGT GAGTTTCATG TGTCGAATCT TATAAAGAAT CATATATCTA GAGGATCACC AATACAAGCT CTGGTTTTGT ACGGAGGAAT CCGCCACAGA GGAGTGTATT TTCCGGGATG GATTCCTTTG ATTTTAAAGG CGTGTGCTTG CGTTGTTCCA CGTGTTGTTC TTGGGAAGCT GTTACATTCT GAATCGATCA AGTTCGGTGT TTGTTCTGAT GTTATGGTGG GAAGCTCTCT GATCAGTATG TATGGGAAAT GGGGATGTGT AGTTTCTGCA CGTAAGGTGT TTGACGAAAT GCCTGAGAGA AACGTAGCTA CTTGGAACGC TATGATTGGT GGGTATATGG GTAATGGAGA TGCAGTTTCG GCTAGTGGAT TGTTCGAGGA GATATCGGTT TGTAGAAATA CGGTGACTTG GATCGAGATG ATGAAAGGGT ATGGTAAGAG AAAAGAGATT GAGAAAGCTA GAGAATTGTT TGAGAGAATG CCTATTGAGT TGAAGAATGT GAAGGCTTGG TCGGTGATGC TCGGAGTTTA CGTTAGTAAT CGAAAAATGG AGTATGCAAG GAAGTTTTTC GAGGATATAC CGGAGAAGAA CTCCTTTGTG TGGTCATTGA TGATCTCCGG GTATTTTAGG ATAGGTGATG TGCATGAGGC TACAAGTGTT TTTTATCTAG TTTTTGCTCG TGATTTGGTG ATTTGGAACA CTTTGATCAC TGGTTATGCA CAGAATGGGT ATTCTGGTGA TGCTATTGAT GCTTTCTATA ATATGCAAGG AGAAGGGTAT GAACCCGATG CGGTAACGGT TTCAAGTGTT TTATCTGCTT GTGCTCAGTC AGGCCGTCTT GATGTTGGCA GAGAAGTTCA CTCTCTGATT AACCGTAAAG GAATTGAGCT TAATCAGTTT GTTTCAAATG CGTTGATTGA TATGTATGCT AAATGTGGGG ATCTAGAGAA TGCGACATCT GTGTTTGAGT CGTTAAGTCT GAGAAGTTTA GCATGTTGGA ACTCTATGAT CTCTTGTCTT GCCATTCATG GGAAAGGCAA CGAAGCTTTA GAGATGTTCA GAACAATGGA GAGCTTAGAT TTAAAGCCCG ACGAGATCAC TTTTCTGGCG GTTCTCACTG CTTGTGTCCA TGGAGGCTTT CTAATGGAAG GTCTAAAGAT ATTCTCGGAG ATGAAAACAC AAGACGTGAA ACCGAATGTA AAGCATTTTG GATGTTTGAT ACATCTCTTG GGACGCTCCG GAAAACTGAA AGAAGCTTAC AGATTGGTAA AAGAAATGCC AGTGAAACCG AATGATACAG TATTGGGAGC TTTACTTGGT GCATGTAAGG TTCATATGGA TACAGAAATG GCTGAACAAG TGATGAAGAT CATCGTGACT GTGGGAAGCA TCACTAACAG TGACAACGAG AACCATCTTG CGTCGATATC GAACTTGTAT GCACACACCG AGAGATGGGA AACAGCTGAA GCATTGAGAG TAGAAATGGA GAAAAGAGGT CTTGAGAAAT CCCCAGGGCT TAGCTCAGTA GTTTTGACCT GA 
Length1572
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8977865.. 8979436
Download Sequence
A.thaliana
AGI-codeAT3G21470.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
33.9853 Ahg481664 transposable element gene
55.9821 Ahg351609 Protein of Unknown Function (DUF239)
58.8388 Ahg890287 Protein of unknown function (DUF1264)
66.6333 Ahg473700 transposable element gene
67.7938 Ahg490754 VQ motif-containing protein
78.2943 Ahg484455 AP2/B3-like transcriptional factor family protein
93.0161 Ahg917747 ferric reductase-like transmembrane component family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression