Detail



ID : Ahg319184

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319184|fgenesh1_pm.C_scaffold_3002200
Sequence
ATGGACGCGA TGGTCTCAAA CTTCAACAAA TCAACTAAAC TCAACGTCAA CTCTTCACCC CCCATGGGCT ACACCGAGAA TGGATCCGCC ACGTACCTCT CCGCAGGCAA CCCCTGCCTC GACTTCTTCT TCCACGTTGT TCCCTCCACG CCCAAGGAAT CTCTTGAGAA GCGGCTACAA GAGGCTTGGG GCCACGACGC CTTAACCACC CTCAAGCTTA TCTGTAACCT TCGTGGAGTC CGTGGCACCG GAAAATCTGA CAAGGAAGGG TTTTACACCG CGGCGTTGTG GCTCCATGGT CACCATCCCA AAACCCTAGC TTGTAACCTC GAGTCCATCT CAACATTTGG TTACTTTAAA GATTTTCCAG AGGTTCTTTA CCGGATTCTA CAAGGATCTG AAATCCGCAG TATCCAGAAA TTGGAATGGA GCCAGAGGAA GGGCGGAGCA TCTCGAAATA GAAGAGCTCG ATTCTCTCGC CAAACCTCGA GATGTGGTTT TGGTCGTGGT CGTAGAAGAG GTGGCGGAAG AGGTCGCGGA ATGGGTCGCC GTGGCCTTCA AATAAGGCCG GCCTCCACTA GGCAGCTGAG GGTAGAGTAC GCAGAGAGGA AGAACCAAGA AGAGAAAGCC AGAGCAAGCT TGGAGCGCAA GCAAAAGAAG GTTTCAATGG GAATGGACGC ATTTACAAAA TATTCTAACG ATCCAGACTA TAGGTTTCTC CACGAACGCG TCTCTGACCT ATTTGCCAAT CAACTAAGGA GAGACCTTGA GTTTTTGACA TCCGGCGAAC CAAACAAAAT CTCCCTAGCG GCTAAATGGT GTCCCTCACT TGATTCTTGC TTTGATAAAG CAACTCTTCT CTGCGAGAGC ATTGCTAGGA AGATCTTTTC CCGTGAATCA TTCCCCGAAT ACGAAGGCGT TGAAGATGCT CACTATGCGT ACAGAGTTCG TGATCGACTA AGGAAACAGG TTCTTGTTCC TCTCCGGAAG ACTCTGCAAC TCCCTGAAGT ATATATGGGA GCGAGAGATT GGGAATCTCT CCCTTACAAC CGTGTTGCAT CAGTGGCGAT GAAGTCGTAC AAGGGTTTTT TCTTGAAACA TGACGCTGAG AGGTTTCAGC AATATCTTAA CGATGCAAGG ATGGGGAAAA CGACGATAGC TGCGGGTGCT CTGTTACCTC ACGAGATAAT ACGAGAATTA GACTGGGGAG GAGACGGTGG ACAAGTCGCT GAGCTGCAAT GGAAACGAAT GGTTGATGAC CTTAAAGAGA AAGGTTCTTT AACGAACTGC ATGGCTATCT CTGACGTTTC GGGATCTATG ATGGGTGAGC CAATGGAGGT TTCAGTCGCC CTTGGTTTGC TAGTCTCTGA GCTATCAGAA GAGCCATGGA GAGGAAAGCT TATAACATTC AGCGAAAACC CTGAACTGCA TTTGGTGACA GGAGACGATT TGAGGTCAAA AACAGAGTTT GTGAGGAATA TGGAATGGGA TATGAACACT GATTTTCAGA AAGTGTTTGA TTTGATTCTG AGAGTCGCCG TAGAAGGGAA GCTTAGGCCG CAAGATATGA TCAAGAGGGT GTTTGTGTTC AGTGACATGG AGTTTGATCA AGCACCGCCT CCGACTCCGA GTAATGGATG GGATACAGAT TATGAGGTGA TTGTTAGAAA GTATAGAGAG AAAGGGTACG GAGAAGCTGT GCCGGAGATA GTGTTTTGGA ATCTGAGGGA TTCGAGGTCA ACGCCTGTGC TTGGAAACAA GAAAGGAGTG GCTTTGGTAA GTGGGTTTTC CCAGAACTTG ATCAAAGTGT TTTTGGAACA CGATGGAGAG ATTGGTGATG GAGATGTTGA TAATGGAGAG ATTGATCCCA TGATGATCAT GGAGGCTGCT ATATCTAAAG ATGAGTATAA GTCGCTTGTT GTAATTGATT GA 
Length1932
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11457270.. 11459237
Download Sequence
A.thaliana
AGI-codeAT3G24780.1
DescriptionUncharacterised conserved protein UCP015417, vWA
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.43398 Ahg947898
31.6702 Ahg493479
33.9411 Ahg475218 Hydroxyproline-rich glycoprotein family protein
35.4683 Ahg319046 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
36.1248 Ahg947711
39.0384 Ahg951695 Protein of unknown function (DUF626)
50.5272 Ahg952085
50.8527 Ahg495065 ethylene response factor 110
59.3464 Ahg478975 expansin 12
60.9918 Ahg942300
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression