Detail



ID : Ahg319280

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319280|fgenesh1_pm.C_scaffold_3002296
Sequence
ATGTCTAGTT ACGTTGGTGT TCTTGTCTCT GATCCATGGC TACAGAGCCA ATTCACACAA GTGGAGTTAC GCACTCTTAA ATCCAAGTTT TATTCGACAA AAACTCGATT TGGTCGTGTT ACTGTGAAAC ATTTACCACC AGTGTTAGCA AAATTGAAAG ATTTCAGTGG CAAGTTTGAT GAAAATGAGA TCAAAACTAT ATTGGATGAG TCTTACCCCA ATCGCGCTAA GGAAGTTGAG TTCGAGACCT TTCTTCGGGC CTTTTTAAGT GTGCAATCCC GAGGATCAAA AGGCGCTTCA TCGTTTCTCA AGACAGGAGC TACAACGTTC CATCATGCGA TCAATGAATC CGAGAAAGCT TCCTATGTGT CCCATATCAA TAGTTATTTG AAAGAAGAAC CTCTCTTGAA GAGCTATCTT CCAATCAATC CTGCTACAAA TGCTTTGTTT GATCTTGTTA AAGATGGTGT TCTTCTGTGT AAGCTTATAA ACATAGCTGT GCCTGGGACG ATAGACGAAA GAGCGATAAA CACGAAGACA GAACTTAATC CATGGGAGAG AACTGAAAAT CTTTCACTCT GTCTCAACTC GGCTAAGGCG ATAGGCTGCA CCGTCGTCAA CATTGGAACT CAGGACATTG CTGAAGGAAC ACCCCATCTT GTACTTGGGT TGATCTTTCA GATTATAAAG ATCCAATTGC TGGCTGATCT CAATCTTAAG AAAACTCCAC AACTTGTTGA GTTGGTGGAA GAAAACCAGG ATGTGGAGGA GCTTATGGGA CTAGCTCCTG AGAAACTTTT GCTAAAATGG ATGAATTTTC ATCTCAAGAA AGCTGGTTAT GAGAAACAAG TAACCAATTT CTCTTCTGAT GTTAAGGATG GAGAAGCATA TGCATACCTG CTCAATGCTC TAGCACCAGA ACACAGCACA CATGTGACAT TAGAGATCAA AGACCCTTCA GAAAGAGCGA TGAAGGTTCT TGAGCAAGCA GAGAAGCTGG ATTGTAAAAG ATTCCTTTCT CCTAAAGATA TAGTTGAAGG CTCTGCAAAT CTTAATCTTG CATTTGTGGC ACAACTGTTT CACCACAGGA ATGGGTTGTC TGATGAGAGT TCAAAGGGGC CTGTCTCTGT TACTGAGATG GTCACAGAAG ATGATGAAAC TTCTCGAGAA GAACGATGCT TTCGCCATTG GATGAACAGT CTTGGTGCTG TGACTTATGT CGATAATGTT TTCGAGGATG TTAGAAATGG ATGGGTTCTT CTTGAAGTTC TTGACAAAGT ATCGCCAGGC TCGGTCAACT GGAAGCACGC GAATAAACCT CCTATCAAAA TGCCATTCAA GAAGGTTGAG AACTGTAACC AAGTTATCAA GATTGGGAAA GAATTGAACT TCTCGCTTGT CAATGTAGCT GGCCATGACA TTGTGCAAGG AAACAAGAAG CTCCTTCTCG CTTTTTTGTG GCAATTGATG AGATACACAA TGCTCCAAAT CCTGAACAAC TTGAGATCTC ACTGGCAAGG TAGAGATATT ACAGAGGCAG ATATTCTGAA CTGGGCAAAT AGGAAAGTCA AGAAATCGGG TCGACCCTCT CAAGCAGTGA GCTTCAAGGA CAAGAATCTG GCAAATGGAA TCTTCTTTTT GGAGCTTTTG AGTGCCGTAG AGCCAAGAGT TGTAAACTGG AGTCTTGTCT CCAAAGGAGA AACAGCAGAA GAGGAAAAGA ATTTGAATGC AACATACATC ATAAGTGTTG CAAGGAAGCT CGGATGCTCA ATCTTCTTGT TGCCTGAAGA TATTTTAGAG GTAAATCAGA AGATGATGCT TATATTAGCT GCTAGCATCA TGAACTGGAG CCTTCAGCAA CAATCAGACA CCGAGTCTAC TGTCTCGGAT GATACTGACG TAAGCTCTGT GACAGAAGAG ATCTCCAATT TGTCCACAGA CGATGGATCT TCAGATGTCT AA 
Length1962
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12662686.. 12665724
Download Sequence
A.thaliana
AGI-codeAT2G04750.1
DescriptionActin binding Calponin homology (CH) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg479101 myrosinase-binding protein-like protein-300B
23.2379 Ahg474038 glycosyl hydrolase 9C1
23.6643 Ahg327213 SCR-like 1
29.3428 Ahg907955
29.4958 Ahg913908 Auxin-responsive GH3 family protein
32.0312 Ahg482688 SAUR-like auxin-responsive protein family
33.5857 Ahg923518
37.1214 Ahg920933
41.5331 Virus0981
44.7214 Ahg946972 Protein of unknown function (DUF295)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression