Detail



ID : Ahg474038

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474038|fgenesh2_kg.1__3992__AT1G48930.1
Sequence
ATCAGAGATT CACAATTTTG AACAAAGAAA TTTTCTTAGG AGAGAAAAAT TAGAATTAAG ATTGATATAG AGAAATGAGG AAGTATGGTG GATCATTGTT CGGCTTAAGC CTATTGCTGA CCGTTCTTCT AGCGGCAGCA ACCGCGGCAG CGGAGTACTA TAACTACGGA AATGCCCTAG ACAAGACATT CTTGTTCTTT GAGGCTCAAC GATCAGGGAA GTTGCCAGCT GCTCAGCGTG TCAAATGGCG TAGCCACTCT GGTCTCAAGG ATGGTCTTGC TCAAGGAGTG AGCTTGGAAG GAGGATATTA CGATGCAGGA GACCACGTGA AATTCGGTTT ACCAATGGCT TTCGCAGTGA CAATGCTATC GTGGGCAGCT GTTGATAACC GGAAAGAGCT ATCCAGTTCG AACCAAATGC AACAGACATT ATGGTCAATC AGATGGGGTA CTGATTACTT CATCAAGGCT CATCCTCAGC CCAATGTTCT ATGGGGTCAA GTTGGAGATG GAGAATCAGA CCATTACTGT TGGGAACGAC CAGAGGACAT GACCACTTCA AGAACAGCTT ATAAGCTTGA CCAGTACCAT CCTGGCTCAG ACTTAGCTGG TGAAACCGCT GCTGCTTTAG CCGCTGCTTC CTTGGCTTTC AAGCCATTTA ACTCCTCTTA CTCTGCTCTC CTCTTAACTC ATGCCAAAGA GCTCTTCTCA TTTGCTGACA AGTACAGAGG ACTATACACT GACTCAATCC CAAATGCAAA AGCTTTCTAC ATGTCATCTG GTTACTCGGA TGAGCTTCTC TGGGCTGCAG CTTGGCTACA CCGCGCCACC GGGGATCAGT ATTACTTGAA ATATGCTATG GACAATTCCG GTTACATGGG CGGAACTGGC TGGGGAATGA AAGAATTCTC TTGGGATAAC AAATATGCCG GTGTTCAAAT CCTTCTCTCC AAGATCTTGT TAGAAGGGAA AGGCGGTGTG TATACTTCGA CATTGAAGCA ATATCAGACG AAAGCCGACT ACTTCGCTTG TGCTTGTCTC AAGAAGAATG GTGGCTACAA CATTCAAACA ACTCCTGGTG GTTTAATGTA TGTAAGAGAG TGGAACAATC TGCAGTATGC ATCCGCGGCT GCTTATCTTC TCGCGATTTA TTCAGATTAT CTCTCTGCAG CAAATGCTAA ACTCAATTGT CCTGATGGTT TGGTGCAACC TCAAGCACTT CTTGACTTTG CTAGATCTCA GGCTGATTAC ATTCTTGGAA AGAACCGACA AGGAATGAGT TATGTAGTTG GATATGGACC GAAATATCCA ATTCATGTTC ACCATAGAGG CGCTTCAATC CCTTCAATCT TTGTTCAACG TTCTTTTGTG AGTTGTGTTC AAGGGTTTGA CTCTTGGTAT AGAAGGTCTC AAGCTGATCC TAATGTTATC TATGGTGCTC TTGTTGGTGG ACCGGACGAG AATGATAACT ATTCCGATGA CCGCTCAAAT TACGAGCAAT CAGAACCAAC TTTGTCTGGA ACAGCTCCAC TTGTTGGCCT ATTCGCTAAA CTCTATGGTG GAAATTTAGG ATCTTATGGA GGAGGGTCAT ATAAACCTTA TGTAACTACA AAACCACCAG TTATATCCTA CAAAGCAACA CCGACAACAT ACAGTCCAAA ACAATCAGGT GCACAAATCG AGTTTCTTCA TTCGATAACT ACCAACTGGA TGGCCGGGAA CACAAGATAC TATAGGCATA AAGTGATCAT CAAGAACAAT TCTCAAAAAC CCATATCAGA TCTCAAGCTT AAGATTGAAG ATCTCTCAGG ACCTATCTGG GGTTTAAACC CAACAGGACA AAAGTATACT TACCAGCTTC CTCAATGGCA AAAGACTTTG AGACCAGGAC AAGCTTATGA TTTTGTCTAT GTACAAGGTG GTCCTCAAGC TAAAGTCTCA GTTTTGAGTT ACAACTAGTT CTTTTTGTTT ATGCTTCTTA TGAGTGAAAG ATGTGAAAAT AGCCAACCAA GTTGAGACTA AATATGAGAA ATGTAAATTT GTGTCCCTTC GTAGAGAATG CTTTTT 
Length2066
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23912701.. 23915883
Download Sequence
A.thaliana
AGI-codeAT1G48930.1
Descriptionglycosyl hydrolase 9C1
TAIR curator summary
Alias[AtGH9C1][GH9C1][glycosyl hydrolase 9C1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg947990
3.16228 Ahg344146
4 Ahg922689 Protein of unknown function (DUF1184)
5.47723 Ahg933725 RING/U-box superfamily protein
6.16441 Ahg932118 Protein of unknown function (DUF1278)
9.48683 Ahg479101 myrosinase-binding protein-like protein-300B
14.0712 Ahg933650 Cupredoxin superfamily protein
14.2829 Ahg482376
15.6525 Ahg497020 Phosphoinositide phosphatase family protein
20.8327 Ahg915186
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression