Detail



ID : Ahg320017

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320017|fgenesh1_pm.C_scaffold_4000074
Sequence
ATGGCGGAGG AGGCGATTCT AGGGTATCTG CTGGACAACG AAGAGATCAC GGATTCCGGT CAATTCTCCG ATGAGCATAA CCTTAACCAC GACGAAGTCG TCAATGTCAT CAAGAGGTTA CATGCTTTCC GTTACATCGA TTTTCAGAAC ATTAAACGGG TATCATCGGT TCTGACTGAT GAAGGGAAGA AATATGCGGC GGAAGGATCG CCAGAGGTAC ATTATTTCTT GGCTGTTCCT GCAGAAGGTA GCATATCCAA GGAAGAACTC CAGAAAAAGC TTTCTCCTTC AGATTGGAAG TCTAAGACTT CTGTATTCAG AATTGGCTCT ATGTACGCTG TGAAAAACAA GTGGGTGGAA GGGGGAAAGC AAGTCTCTAG GAAGGTTCAA CATGTTGAAG ATAAAGTGAA GAACTTGCTT TTACAAATAC AGGAAGGAAT GGAACTTGAC GAAGAAAGTC TCAATTATCT CAAAAAAACC AGAAGCCTTG TAGAAGAAAA GGTATGGAAG GGCTATTCCG TGAAGAAAGG TCCTAATTAT GCTCCCAAAA GAATGAGTTT TGCCACCGAC TTGTCACGAG AAAATCTACA AAAGAGTATA ACTTCAATGC TAAATGACAG CCTGTTGATG CTGGACATCT TCACCCCCTT CTCAAGGTAC TCAAATGTAC GGAAGCAGTT CAAAGACATA TTTCGTCAGA TGGGATTTGA AGAGATGCCA ACAAACAACT TTGTGGAGAG CAGCTTCTGG AATTTTGATG CACTGTTCCA GCCTCAGCAG CATCCTGCTC GTGACTCTCA TGACACCTTC TTTCTAAAAG CTCCTTCAAC TACAAGGGAA TTGCCAGAAG ATTATGTTGA GAGGGTGAAA CAAGTTCATG AGTCTGGTGG ATATGGATCG AGAGGGTATA ATTATGATTG GAAAAGAGAG GAAGCAAACA AAAATCTCCT TCGTACCCAC ACAACAGCGG TCTCATCTAG GATGCTTTAT GCACTTGCAA AGAAACCTTT CACTCCCAAG AAGTACTTTT CTATAGACCG TGTCTTCAGA AACGAGGCTG TTGACCGAAC CCATCTGGCA GAGTTCCATC AGATTGAAGG TTTGGTCTGT GACCGTGGCC TTACATTGGG TGATCTCATC GGTGTATTAC GGGACTTCAT CTCACGCTTA GGGATGTCCA AGCTGCGCTT CAAGCCTGCT TACAACCCTT ACACCGAACC AAGCATGGAG ATTTTCAGCT ACCACGAAGG ATTAGGGAAA TGGGTAGAAA TTGGAAACTC TGGCATGTTC AGACCAGAAA TGTTGCTACC GATGGGTCTC CCAGAGGACG TTCGAGTCAT TGCATGGGGT CTCTCTCTTG AAAGACCAGC AATGATTTTA TACGACATTG ACAACATCCG TGACCTGTTT GGACACAAGG TGGATCTTGG TCTCATTAAA CGGAATCCGA TCTGTCGCAT TGGAATCGAG TGA 
Length1473
Protein Sequence
Protein Residue
Map Locationscaffold_4: 429272.. 432617
Download Sequence
A.thaliana
AGI-codeAT4G39280.1
Descriptionphenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.2788 Ahg486449
24.4949 Ahg489660 Tetratricopeptide repeat (TPR)-like superfamily protein
25.807 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
30.7896 Ahg926115 Chaperone DnaJ-domain superfamily protein
31.6544 Ahg475246 DNA-directed RNA polymerase family protein
51.4781 Ahg480957
60.1664 Ahg472581
79.0569 Ahg930529 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
80.2558 Ahg473420 heat shock transcription factor A1D
81.2896 Ahg481291 RNA binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression