Detail



ID : Ahg479008

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479008|fgenesh2_kg.3__1709__AT3G15590.1
Sequence
TTGGCACGTA TAAACCCTAG CAGAGGCATT AAACCCTGAT AGTAGTTAGG GATCACTTCT CTCCGGCGAA ACAATCACTC GAAAATCGAT CCTAACCTCA ATTGATTGAA GGAAGTAATG TATTCGCTTT CGAGGATTCT CCGAAGGAGT CGAAGATATA ACTTTGCACC TTCTTCGTTT GGTGCGGTCA GTAAATTAGA AGTATCATCA AGTGGTGGTG ACAAAGAAAG GGTCTTTAAA TCATCTGGAT TGATTTATAA TAAATCTCAA GGTTTAATCA GACTTTATTC CACAAGAGAT GTGTTTTCAC GGTTCTTTGG CATCCATAAG CTTTCTTCTA TAGCTGATGC TGAAGACAAA GGAGATGAGG TAGTAAGGGA AGAGGAGTTG TCTGAATCAG AGGAGGCGTT TCCTGTTTCT GGGGATGTAT CAGAGGGAGT TGTTGATGAT GATTCTTTGT TCGAGTCTGA GGTTGGTAGT GACAATGATG GTCTTGAAAT TGAAGGTGGG AAACCAACAA AGAAAAGAGC TCAATCTGAG CTATATGAAT CCATTGTTGC CTATAAATCA GTGAAACATG TTCTTGAAAA ATGGGTCAAA GAAGGAAAAG ATTTGAGTCA AGCTGAGGTT TCTCTTGCTA TATTCCATCT GCGTAAACGT AAATACTATG CTATGTGTTT GCAGTTGTGG GAGTGGTTGG GAGCTAATAC GCAGTTTGAG TTCACAGAGG CAAATTATGC TTCTCAACTG GATTTGGTGG CCAAGGTACA TAGTTTACAA AAAGCTGAAA ACTTTTTGAA GGATATTCCA GAATCTTTCA GGGGAGAAGT GGTATACAGA ACCCTGCTGG CAAATTGTGT ACTTAAGCAT CATGTAAATA AAGCTGAAGA TCTTTTTAAT AAAATGAAAG AACTAAAATT TCGAACAAGC GTGTTTGCTT GCAACCAGCT GCTTCTCCTC TACAGTATGC ATGATAGAAA GAAGATAAGT GATGTTTTGT TGCTAATGGA GAGAGAAAAC ATCAAGCCGA GTCGTGGTAC GTATCAGTTT TTAATCAATA GTAAAGGTTT AGCTGGGGAC ATAAATGGAA TGGAGAAGAT CGTGGAGACA ATGAAGGAAG GAGGTATCGA AGTAGATCCA GAACTGCAGT CTACTCTGGC TAAGTACTAC ATAAGAGCGG GGCTTAAAGA ACGAGCACAA GACCTTATGA AGGAGATAGA AGGGAAAGGT TTGCAACAAA CTCCATGGGT GTGCCGGTCA TTACTCCCAC TTTATGCAGA CATAGGAGAC AGTGACAATG TGAGAAGACT GAGTAGGTTT GTTGATCAAA ATCCGAGATA TGATAATTGC ATTTCTGCCA TTAGAGCATG GGGAAAGCTG AAGGAAGTCG AAGAAGCAGA GGCAGTGTTT GAGAGACTTG TGGAGAAATA CAAAATTTTC CCTATGCTGC CATATTTTGC CCTCATGGAG ATATACACAG AGAACAAGAT GCTAGCAAAA GGCAAAGATC TGGTTAAAAG AATGGGAAAT GCAGGGGTTA CGATTGGCCC GTCGACATGG CACGCTCTTG TGAAGCTATA CATCAAAGCG GGAGAAGTTG GAAAAGCTGA GTTGATATTG AACAGAGCTA CAAAGGATAA TAAGATGAGA CCTATGTTCA TTTCTTACAT GGCGATTCTC GAGGAATATG CAAAAAGAGG CGATGTTCAT AACACAGAGA AGGTATTCAT GAAAATGAAA AGGGCAAGCT ATGCAGCTCA GCTTATGCAG TATGAAACCG TTCTGTTGGC TTATATCAAA GCCAAAACTC CTGCTTACGG GATGTTTGAG AGGATGAAGG CAGATAATGT GTTCCCAAAC AAGAGTCTTG CTGCGAAACT GGCTCAGGTT AATCCGTTTA AAAAGTGTCC AGTGTCTGTT TTACTTGACG AATGACAATA ATCATCCTAT GTATTGAGCG AGCTGTTTTG TTTGTTCTGT TTGCTTCCAA GCTAGGAAAT AATAAATAGA GGATTCGTTT TTCTTCCAAA GTTTCTCACT TTGAGGTCTG TGTTCTTGTG GTTTTT 
Length2066
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6216087.. 6218611
Download Sequence
A.thaliana
AGI-codeAT3G15590.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.64575 Ahg496832 P-loop containing nucleoside triphosphate hydrolases superfamily protein
4.89898 Ahg909381 tubulin-tyrosine ligases;tubulin-tyrosine ligases
5.47723 Ahg928901 Galactose oxidase/kelch repeat superfamily protein
7.2111 Ahg923871
10.8167 Ahg477806 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
13.2288 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
13.2288 Ahg479316 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
16.2481 Ahg492683 Pentatricopeptide repeat (PPR) superfamily protein
18.6548 Ahg918145 P-loop containing nucleoside triphosphate hydrolases superfamily protein
18.6548 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression