Detail



ID : Ahg320079

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320079|fgenesh1_pm.C_scaffold_4000136
Sequence
ATGGTAATCA CTGGCTTGGT TCTAGACCCA TTTGCTTCAA GCCGGTTAAT TGCTTTCTGC GCATTATCGG AATCTCGGTA TCTCAATTAC TGTGTGAAGA TTCTTAAAGG TATTGAGAAC CCTAATGCGT TCTCTTGGAA TGTGACGATC AGAGGTTTCT CTGAGAGCGA GAATCCTAAA GATGCGGTTT TGGCCTATAA GCAGATGCTG AGACGTGGTT GTTGTGAGTC CAGACCGGAT CATTTCACTT ACCCGGTTTT GTTCAAGGTT TGTGCTGATC TTAGGTTGAA TAGTTTAGGT CACATGATTC TTGGGCATGT TTTTAAGCTG AGATTGGAAT TGGTTAGTCA TGTGCATAAT GCGTCTATTC ATATGTTTGC TTCTTGTGGT GAAATGGAAA ATGCGAGGAA GGTGTTCGAT GAAAGTCCTG TTAGGGATTT GGTTTCTTGG AATTGTTTGA TTAATGGGTA TAAGAAGATT GGGGAGGCAG AGAATGCGAT AGAGGTATAT AAGGTGATGG AATCTGAAGG AGTTAAGCCG GATGATGTGA CGATGATTGG GTTGGTTTCT TCGTGTGCAA TGTTGGGTGA TTTGAATCAT GGGAAAGAGT TTTATGAATA CGTAAAAGCA AATGGACTGA GAATGACAAT TCCTCTTGCT AATGCTTTGA TGGATATGTT TTCAAAATGC GGAGATATTC ATGAGGCACG AAGAATATTT GATAACTTGG AAAAGAGAAC AATTGTGTCG AAGCTTTTTG ATGATATGGA AGAAAAGGAT GTTGTGATGT GGAATGCCAT GATCGGTGGA TCAGTCCAAG CCAAGCGTGC TCAAGACGCT TTGGCATTGT TCCAGGAGAT GCAAACAAGT AACACAGATC CTGACGAAAT CACCATGATA CATTGCCTAT CTGCGTGTTC TCAGCTTGGT GCTCTTGATG TTGGCATTTG GATTCATCGT TACATCGAGA AACACAGTCT TAGTCTCAAT GTTGCGCTAG GAACTTCATT GGTCGACATG TACGCCAAAT GTGGTAACAT CTCAGAAGCT CTCAGTGTTT TTCACGGAAT TCAAACAAGA AACTCGCTTA CATACACAGC GATAATCGGA GGTTTAGCTC TTCACGGAGA TGCATCTACT GCTATATCAT ACTTTAACGA AATGATTGAT GCAGGGATAG CCCCAGACGA AATCACTTTC ATAGGGTTAT TATCAGCTTG TTGCCATGGT GGAATGATCC AAACCGGCCG TGATTATTTC TCTCAGATGA AGTCTAGATT TAACCTAAAT CCTCAATTGA AACATTACTC TATAATGGTT GATCTTCTAG GGAGAGCCGG GCTATTGGAA GAAGCGGACA AGCTCATGGA AAGTATGCCA ATGGAGGCAG ATGCTGCGGT TTGGGGAGCT TTATTATTCG GTTGCAGGAT GCACGGAAAT GTTAAGTTGG GAGAGAAAGC GGCTAAGAAG CTTCTCGAAC TTGATCCAAG TGATAGCGGG ATCTATGTGT TGTTGGATGG CATGTATGGA GAGGCTAATA TGTGGGACGA TGCAAAGAGA GCGAGGAGGA TGATGAACGA GAGAGGTGTA GAGAAGATTC CTGGTTGTAG TTCCATTGAG GTTAACGGAA TTGTCTCTGA GTTTATCGTT AGAGATAAAT CAAGACCGGA ATCTGAGAAA ATCTATGATT GCTTACATTG TCTTGGAAGA CATATGGGGA GCTCGTTGAG TGTACTATAT TCGGAAATGA GATTACTTAG AAGTTAG 
Length1767
Protein Sequence
Protein Residue
Map Locationscaffold_4: 877998.. 879813
Download Sequence
A.thaliana
AGI-codeAT2G22410.1
DescriptionSLOW GROWTH 1
TAIR curator summary
Alias[SLO1][SLOW GROWTH 1]
Gene coexpression
MR
MR Locus Description
27.258 Ahg358424
33.4664 Ahg481036 Mitochondrial transcription termination factor family protein
43.2666 Ahg332429 Ubiquitin carboxyl-terminal hydrolase-related protein
47.833 Ahg935321 Mitochondrial transcription termination factor family protein
48.5798 Ahg927204 tRNA modification GTPase, putative
53.2353 Ahg480596 Pentatricopeptide repeat (PPR) superfamily protein
60.8769 Ahg484639 Tetratricopeptide repeat (TPR)-like superfamily protein
70.342 Ahg485806 fructokinase-like 1
77.201 Ahg480727 Noc2p family
80.6846 Ahg475515 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression