Detail



ID : Ahg481036

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481036|fgenesh2_kg.4__96__AT2G21710.1
Sequence
ATGCTTCGCC ACTGCAACGT CACCTACACC TCATCGTTTT CCCTCATCTC CTCCTCTCTC CGCCGCCAAG ACAACGCCGA CGATTCACAA GATACAGTAA TCCGTCGCCG GCACAATGCT AGATCCCTTT CTCTATACAT CCGCCATAAC CGAGACCTAA AGCTTAACAA AAACCCTAAC GAATCTCAAG AATCCTTCGT TCCTCCTCCT CCGCGGCGAG ATATTGACGG TGATGACCGA TCGAAGCTAC TTGAGCTCTC TCTTGTAACT AGAAGAACTC CACAATTTCC TGGTTCAATC TACGCTCAAT CTGCTTCTGA TGCTGATGTT GCTTCTTCTC TTCCTTCGCT TCGTAAATTT CTTGGGTCTG ATGGTGATGA CGACGGAGAG AGCGAGAGAG AGATGATAGT TAAAGCGCTT GAGATTAGGA GGAAAGTGAC GAAAGAGATT ATCAAAGAGT CTTTGGTGAG GAAAGGTAGA TTTGGGATTA CGTATGCGAC TAATGTGACT GATCGTTTGG GTGATTTCGT TGATCATGTT ATGATTCAAG CTGCGGCGTT GAAGCTGTTG CCGGAATTTT CAGAGTCGAG GTTCAATCTT CGTGCCAGGA CTGTTATAGA AGACTCCAAT TTCGTGCCTC TTGTAAGGTG GTTGAAGCAC CATGAGTTTT CATATAATAG AATTGCGAAG ATCATATGCA TGTCAAAAGG AAATCTTGAC TCCATAAGGA TCATGATCGA GTGGCTGAAG ACCATTCATG TGAAGGGTGA ATTCATTGGA GTTGCGTTCT TGAGATCTGG GGACAACATC TTGCAACGTA GTCGTGAAGA ACTGGACGAG ATTGTTGAGT ATCTTGAGAG CAATGGTGTG AGGAGGGATT GGATGGGATA TGTTGTTGGG CGATGTCCGG AGTTGTTGTC TTTTAGCATG GAAGAAGTGA AAAGCCGTGT TGATTTCTTC TTGAAAATGG GTATGAATCA GAATGACTTT GGCACGATGG TTTATGATTA TCCAAAGATA CTTGGGTACT TCTCATTCGA AGAGATGGAG AAAAAGATCA ATTACCTGAA AGAATTTGGC CTTAGCACAG AAGAAGTTGG GAGACTATTA GCCTTCAAGC CACACCTCAT GGGATGCAGT ATTGAAGAAA GGTGGAAGCC TCTAGTCAAA TATTTCTACT ACCTTGGAAT CCCCAAAGAA GGAATGAAAA GAATCCTTGT CGTGAAACCA ATTCTTTACT GCATTGATTT GGAGAAGACA ATCGCCCCAA AGGTAAGATT TTTGCAAGAG ATGGGTATCC CTAATGAGGC CATTGGAAAC ATGTTAGTAA AGTTTCCTTC CTTACTCACA AACAGCCTCT ACAAGAAAAT CCGACCTGTG GTGATTTTTC TCTTAACCAG AGCCGGAGTA ACCCAAAAGG ATATCGGTAA AGTTATCGCA ATGGATCCAG CTCTCCTTGG ATGCAGCATA GGGACAAAGC TAGAACCCAA CATGAGATAC TATATATCAT TGGGTATTCG ATTTCATCAA CTAGGCGAAA TGATTGCTGA TTTCCCGATG CTGCTTCGTT ATAACGTTGA TAATCTGCGT CCAAAATACC GTTACTTGCG AAGAACAATG ATCCGTCCGC TTCAAGATCT CATTGAGTTT CCCAGATTCT TTAGCTACTC ACTGGAGCGT CGGATAATCC CAAGGCACAC CATTATGGTT GAGAACAGAG TTAACTTCAA GCTCAGATAC ATGTTGGCTT GTACGGATGA AGAGTTTGAG AGGAGAGTTA GAGATAAAGT GGAGAGAAGA GAGAGATTCG AAGCTGGTCT TGACTCCGAG GATTCGGAAT GAGAACATCA TCGATAAGGA GATTGATTTC TCAGACTCTC CGGAAGAAGA ATGAAGAGGA TTTAGCATAA TGAATAGTTC TGTACATAGT CTTGTACAGT TAACACAATT ATAAACGAAC GAATGTGTCA ATTAGTCT 
Length1978
Protein Sequence
Protein Residue
Map Locationscaffold_4: 426410.. 428905
Download Sequence
A.thaliana
AGI-codeAT2G21710.1
DescriptionMitochondrial transcription termination factor family protein
TAIR curator summary
Alias[EMB2219][embryo defective 2219]
Gene coexpression
MR
MR Locus Description
24.2074 Ahg494908
26.1916 Ahg926900 flavodoxin family protein / radical SAM domain-containing protein
33.4664 Ahg320079 SLOW GROWTH 1
35.2987 Ahg474891 general control non-repressible 3
37.1483 Ahg328817 HIT-type Zinc finger family protein
37.8418 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
39.1918 Ahg924637 DEA(D/H)-box RNA helicase family protein
42.3556 Ahg495292 methyl-CPG-binding domain protein 13
51.4781 Ahg327675 pentatricopeptide (PPR) repeat-containing protein
53.3667 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression