Detail


ID : Ahg320641

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320641|fgenesh1_pm.C_scaffold_4000698
Sequence
ATGGTTGAGG AAAGGCCTCT ACCTCGGACG CTTGTTGCTC AGAAGATAAT GATGGAAAGT GCAAGGAAAA CCCTCATGGA TGATGAAACA TGGATTATGG GTATGTATGA TATGGGAGGA GTGGGAAAAA CAGCTCTTCT CGCACAAATC TATGATAAGT TATATGAAGA AAGGCAGATC TTTGACCTTG TGATTTGGGT TGACGTGTCT AGAGATGTAC ATATAGAAAA GATTCAAGAA GACATTGCTG AAAAACTAGC TATTTATACA CACTTTCTTA AGGAAAAGGA GATTCTTGTT ATTATTGGAC GACGTGTGGA AGAAAGTGGA TATAACAGAG ATAGGATAGT ATTTACCACT CGGTCTAGAG AAATATGTGG ACACATGGGA GTTTATGATC CTATGGAAGT TCAGTATCTG GCAGAGAATG ATGCATGGGA ATTGTTTCAA CGAAAAGTCG GACAAAAAAC ATTATTGAGT CATCCAGACA TTTCTATGCT AGCAAGAAAA ATTGCTAAAA AATGTCATGG CCTACCGTTA GCACTCAATG TCATTGGTGA GACCATGTCA TGTAAAACCT CTGTATATGA ATGGAAACAC GCAATCGACA GAATTTTCAA GAATGGAAGA GTATATTCTC CCTGTTCTTT GTTGTATAGC TACGACATTT TGAAAGGAGA ACATGTTAAG TCGTGCTTCC AATATTGTGT TCTATTTCCT GAAGATCACA AAATACGTAA AGAAGAATTG ATAGAGTATT GGATATGCGA GGGTTTTGTT GATGGGAAAG ATGGTAGAGA AAGAGCTCTA AACCAAGGTT ATGAGATACT TGGTACCCTT TTACGTGCAG GTTTATTGTT GGAGGATGCA AAGACTAAAT CATATGTGAA AATGCATGAT GTGGTCCGTG AAATGGCTAT CTTGGAAATC ACAAGGAGAG ATGTATTGTA CAAGGTGGAG CTAAGTTACG CAAATATGTC GTTGATGCGT ACTAACATCA AAATGATATC TGGCAACCCC GATTGTCCTC AACTTACAAC TCTCCTTCTC AAAACAAACT ACAAGTTGGA AAATATTTCA GGTGAATTTT TTATGTCTAT GCCAATGCTA GTAGTCTTGG ATCTGTCAAT GAACTACCGC CTCGAAGAAT TGCCAGAAGA AATATCAGAG TTGGTCTCCT TGCAGTTTCT TGACTTGTCA TACACAAGTA TAGATCGACT GTCAGTTGGA ATACAAAAGT TGAAAAAACT ATTACATCTA AATATGGAAT CCATGTGGAG ACTTGAGAGT ATTTACGGGA TATCGAATTT GTCGAGTTTG AGATTATTGA AACTACGAAA TTCCACGGTA TTGGTAGATA ACAGCTTAAT AGAGGAGCTG CAACTCTTGG AATATCTAGA AACTCTTACC CTAACAATAC CATCAAGTTT GGGTTTGAAG AAACTGTTCT CTGCTCACAA GTTGGTGAAA TGCATTCAAA AGGTATCTAT AAAGAACCTT GAGGAAAAAA CATTCAAGAT ATTATCTTTT CCAGTCATGG ATAATCTGAA TAGTCTCGCC ATATGGAAGT GTGACATGTT GGAGATAAAG ATAGAGAAGT CACCATCATG GAACAAAAGT CCAACAAGTT CATGCTTCTC TAACCTCTCA TATATATGGA TACGAGAGTG TTCGGGTCTA AGGGATTTGA CGTGGTTGTT GTTTGCACCA AACCTTATTG ATCTGACGGT TGGTTCGATA AATGAACTAG AGGATATAAT AAGCAAAGAG AAAGCTGATC AAGCTAGAGA AGAGCAAGGT AATATTATTC CTTTTCAAAA ACTGGAATCT CTCTCCTTGA TTGATTTACC TACGTTAAAA AGCATCTACT GGAGTCCTCT ACCTTTTCCA TCTCTTAAGA GAATCAAAGT ACAAAAGTGT CGAAAACTTA GAAGGCTTCC ATTCGACTCT AAAAGTGGTG TTGTAGGTGA AGATCTTGTC ATAAATTACG GAGAGGAGGA ATGGATAGAA AGAGTTAAAT GGGAAGACGA AGCCACAAGA CTTCGTTTCT TATCTTCTTC CTACAAAACC CATAAAGAAA TGACTAAACT ATCTAGCTCT GCGGGAACTT GTGGGATAAA AGATTTCTAA
Length2130
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G12210.1
DescriptionRPS5-like 1
TAIR curator summaryRFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5.
Alias[RFL1][RPS5-like 1]
Gene coexpression
MR
MR Locus Description
9 Ahg900409 2A phosphatase associated protein of 46 kD
18.4932 Ahg330900
24.4949 Ahg937443 F-box and associated interaction domains-containing protein
29.0345 Ahg906074 Ribosomal protein L30/L7 family protein
32.249 Ahg337696 COP1-interacting protein-related
33.1512 Ahg342380 alternative oxidase 1B
35 Ahg948065
36.2353 Ahg895168 NAC domain containing protein 70
38.6523 Ahg921475
39.2938 Ahg923213
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression