Detail


ID : Ahg337696

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|337696|fgenesh1_pg.C_scaffold_1004261
Sequence
ATGGCTGATT TAGGAGAAAG CAGCAAAAGT CGAGTTGTCT TCGTGAAGAC AAGTATTGAT ACTCGTCTTG GACTTCTCCT TGACAGTGAT GATAGTGTAT CTGCTTTCAA AGACAAAATC TGCAAGGAAC ATGAACAGTG TTTCCCAAGT GTTGGAAAAA TTACAATTTC TTCTGCCTTG AAGGTTAACT TGGGTGGTAA CGATTACCAC TTGCCTGATT CTATGATATT GAAAAAGGCT CTTCAAGGCA TCAGTAACAA CAACTGGTTT CTATCTGTCG ACGTCATGCA TGTCGAGGAG AAGGGTGAGC TCCAGATTGG TGAAGTTGCT TTAGCAAACC ATGATTTGCA TGTTACGAAG AACAATGATC CGAGTGAAGT AGTTGAGAAG AAAACGAGGA AGAGAAAACC AAAGAGTTCT GGCAAAAGTA GTAAGAAACC CTCCGTAGAG ACACCAACAG AAGCTAAAGA TGTTGAAAGC GGTGAGGGAA ATGTCACTAT AATGGGAGAG AATCAGCATG CATACCAAGA GGAGCTAGTA GATGGTCATG CCAATGATGT TGAGGCCAAT CTTGATCTTA TGGGGACAAT GGAACAAGAT CTTCAAAAGG ATGTAGCAAA TGCTGATTTA GTCATGATTG ACGAAGACAA GGATCTTGAG AAAGATAATC TTTTAACTGA ATTATACCAA ACTTCTGATG ATGCTGAGAA CGAAGGTCTC ATAGATCCTG TTAATGCTAC TTGTCAAGCA ATTGAAAACT ACGAAACTGG GATGGGTACA AAGGAAGAAG ATGGTGATGA GGAGGCTAAA TCTGAGAAGC CTAAGAAGAA AAAAAGAGCA AGGAAAGACA AGAATCTGGC TAAAGAAGAT GGTCTAGTTG CTTCTAGCTC AAGGAACGCA GAGGAGGATG TTGAAAAAGC TGCGAGGAAG TCAAAGAAGA AATCGAAGAA ACAAGAGTCT TCGAACGTTG TGGAGGAGGA TGCTTAA
Length987
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28209726.. 28211285
Download Sequence
A.thaliana
AGI-codeAT4G00580.1
DescriptionCOP1-interacting protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg950725
8.83176 Ahg474053 Integrase-type DNA-binding superfamily protein
9.79796 Ahg916965 Seed maturation protein
24.0832 Ahg344061 SU(VAR)3-9 homolog 7
30.7246 Ahg900118
31.241 Ahg888873 Pectin lyase-like superfamily protein
32.249 Ahg320641 RPS5-like 1
44.1588 Ahg317904
45.3982 Ahg495460 F-box/RNI-like/FBD-like domains-containing protein
45.5631 Ahg475881 terminal EAR1-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression