Detail



ID : Ahg320921

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320921|fgenesh1_pm.C_scaffold_4000978
Sequence
ATGGATTATT CAGATGATGA CATCATCGAT ATGGAATCAG GGGAGGAGGA GGATCATTAC AGCGATGGTG GTAACGAATA TGCCGATCAC TACCCTCTTG AAGAAGACGC AATTATTCCA TCTGAGAAAA GTTACGTAGT TCTCAAGGAA GAAGACATTC ACAAGCATCA AAGAGACGAT ATCGAACGAG TTTCCACGGC TCTCTCTCTA AGCCAAGTCG AAGCGACCGT TCTTCTTCTT CATTATCATT GGAGTGTTAG TAAGATCTAC GAGGAATGGT TTACGGACGA AGAGAGAATC CGTAAAACAG TTGGAATCCT GAAGGAGCCT GTCGTTGACG TTAATGGTAG AGAAGTGGAT ATCCAATGTG GAATTTGCTT TGAATCATAC ACTTCAGATG AAATTGCTAC GGTTTCTTGT GGTCATCCTT ATTGCAAGAC TTGCTGGACT GGTTACATCT CTACAACAAT CAACAACGGT CCAGGATGTT TAAGGGTTAA ATGTCCTGAG CCTTCTTGTT CCGCTGCGGT TGGTCAAGAT ATGATCGATA AGGTTAGTAA TAAAGAAGAT AAGGAGAAGT ACTATAGATA TTTTCTTAGG TCTTATGTGG AAGAAGTTGG GGAGAGAACT AAATGGTGTC CATCACCGGG ATGCGAATGT GCGATAGATT TTAGTGTTGG GAGTGGAAGT GGAAGTAGTA GTTATGATAT TTATTGTTTG TGTTCGCATA GCTTTTGCTG GAATTGTACT GAAGATGCTC ACAGTCCTGT GGATTGTGAC ACGGTCTCAA AATGGATATT CAAGAACCAG GATGAGTCCG AGAACAAGAA TTGGATGCTT GCGAATTCAA AGCCTTGTCC TAAATGCAAA CGTCCTATCG AGAAGAACGA TGGATGTAAC CGTATGACAT GCTCAGATCC ATGTAGACAT CAGTTTTGTT GGATTTGTCT TGAACCACAT TATGGTCACG GTGCTTGCAA CAAGTTCGTT GAGGAGAAGG CTGAAAGTAA GAGAACATTG CTTCAGAATG AAATCAAAAG ATACACGCAT TATTATATAA GATGGGCAAA CAATCAATCG TCGAGGCTAA AGGCTATGAG TGATCTGGAG AAGTTGCAAT CGGTGCAGCT TAAGCAGCTT AGTGATAAAC AAAGCAAACC AGAAACTGAT CTCCAATTCA CCTTAGATGC ATGGATTCAG ATCCTCGAAT GTAGGAGAGT CTTGAAATGG ACATATGCAT ATGGATACTA CCTTCATGAT CTCGCCAAGC GACAATTTTT CGAGTATTTG CAAGGGGAGG CTGAAACAAG TTTAGAGAGG CTTCATCATT GTGCAGAGAA TGAGTTGAAA CAGTTTATCA ATAAAACTGA AGATCCATCC GAAACTTTCT CTGCTTTCCG GATGAAATTA ACTAATTTGA CTAATGTAAC TAAAACCTAC TTCGAAAATC TGGTGAAAGC TTTGGAAAAT GGTCTTGCTG ATGTGGCATA TAATTATGAG ACGACCAAAT CAAGCGAAGA ATCTGATGAT TTTCTCGAAA CACAAAAGCT ATATGATACT TATATAAGTG AAGGCTACTT CTTCTGA 
Length1587
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14240504.. 14242414
Download Sequence
A.thaliana
AGI-codeAT2G31760.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[ARI10][ATARI10][ARIADNE 10][ARABIDOPSIS ARIADNE 10]
Gene coexpression
MR
MR Locus Description
28.9482 Ahg945851
29.0689 Ahg311290 Phosphatidylinositol-4-phosphate 5-kinase, core
31.4643 Ahg476164 similar to RCD one 3
33.4664 Ahg925189 F-box and associated interaction domains-containing protein
38.8844 Ahg947721
43.8178 Ahg924853
45.0555 Ahg323632 Protein kinase superfamily protein
56.3915 Ahg477001 glutathione S-transferase TAU 22
59.4979 Ahg920819 Zinc finger, C3HC4 type (RING finger) family protein
60.5475 Ahg476650 Nucleotide-diphospho-sugar transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression