Detail



ID : Ahg476164

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476164|fgenesh2_kg.2__1294__AT1G70440.1
Sequence
ATGGCGGCAC AAGTCGAGAT CGAAGATCAA GAATCCGTCA CCAATTTAGA CAACGGCGAA ATCATCAACC CCGGTTCTCA ACCACCTAAC TTCTCCGGCG AATCAACGAC TCTTCTCCAT GAATCCACCT TCGAACACGA CCTCGTCAAA AACTGTTTCC TCACCGGAAT GGGATCATTC GCCAACGAGA CAACAATCGT CACCGTACGA AAAAACTCAA CGGAGAGAAG AATCACAACC AAAGCTAAAT TCGCTGTGTT CAAGATTTTC ACAGAAGCTA TGACGAAGAA GAACAACGGA GACGCCAATG TTAAATACGG ATGGTACTCT GGTTCCAAAG AAGAGATCGA TCGTGTTATT ACGTATGGAT TTAGTAATCG TGAGATCGAG AAATTCGAAA ACGACGTCGG ATCTCACGGT GTTGGAATTC ATCTTGTTCA TCATCGATAC TCTCTCGCTG CGGCTTTAGT TGGTGAAGGT GATGAAGAAG GGATAAAGAA TATTCTCTTA TGCCGTGTGA TTCTTGGTAA ACCGGAACAA ATCGAAGCTG GTTCTAAACA ATCGTACCCG AGTTCGAACC GATTTGATTC TGGTGTTGAT AATCTTGAGA ATCCAAGAAA ATATGTGATT TGGAGCTCTA ACATGAATTC TTACATTCTT CCTACTTATA TCGTCAGTTT CAAATCTCCT CTTCTCAGAG GTCTAATTGG AAGAGCAAGG TCACCATGTG TTAGCTTCTC TGCTCTTATG TCAATTCTTT CGAAGTCACT TGATGTTACA AGAATGAACT TGATTTTGAC AAGTTATGAT GATTTTAGGA AACGGAAGCT GAGAAGAGAG CAGCTAGTTA GGAAGATTAG GGAAGTGGTT GGAGATCATC TTCTTTTCAA GATACTCAAG AATCAGAGGC GTTAAAAAGT GTGTTAGGAG GACGTTACAG ATTTTACCTG AAGTAGCCAA AGTTTAACAG AAGCTGATGA TGCGTAATGG AGT 
Length993
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13580956.. 13582415
Download Sequence
A.thaliana
AGI-codeAT1G70440.1
Descriptionsimilar to RCD one 3
TAIR curator summaryEncodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.
Alias[SRO3][similar to RCD one 3]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg923785
14.8324 Ahg899837 Domain of unknown function (DUF313)
15.2971 Ahg326529
20.9762 Ahg924031 Family of unknown function (DUF716)
31.4643 Ahg320921 RING/U-box superfamily protein
31.749 Ahg911037
37.0945 Ahg316133 Protein of unknown function (DUF579)
41.1704 Ahg919963
41.328 Ahg890921
50.0799 Ahg892007
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression