Detail



ID : Ahg322445

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322445|fgenesh1_pm.C_scaffold_4002502
Sequence
ATGGCGAGTT TTCTGGTGGG CTTCTTGTTG CCTTCGCTAC TTCTGGCAGC TGCACTTATT AACTGGAGTG TCATATCCTT GGTTGATTTG ATTGCTTTCC TCCTCGTTCA CTATATTGCA CCTGAAATTG GACACCGTTT TCAGAGGAGG CATTGGCTAT TATGGCCCAT TTTCATCTTT TCCTTTGCAG TATTTCTTGC TCAAGTGGTC TACCTTGTCA TTTGGGCTAC TCTAGGTCAA GACTGGGATA CAGCAGATAC TGGCTGGATG AGAGTTTTTG GCTTTATGAT ATTAAAGTCT TGGAGAAACC CCACTGTTAT GTATTTCTTG GCTTTACAAC TACTAACATC ATTAGTTGCT TTAGCTGACA TATACAGTAG TAGATTCGGC TTCGCTCAAT GGCGGGACAC ATGGTGGTCT TACTTTTCAG GAATTTTCGA ACACCTAGGA AGTCATCTTA GGGTTGCCTC CTGCTTGTTG TTACCAGCAG TTCAATTGGC AGTGGGAATC TGCAATCCAT CATGGGTTTC TTTGCCATTT TTTATTGGAA GCTGTGCCGG TCTTGTGGAC TGGTCCTTGA CAAGCAACGT TTCAGGAATT TTCAGGTGGT GGAGAGTTCT TTATATCTAC GCAGGATTCA ACATTGTCCT GCTTTACCTC TATCAACTAC CAATAAACTT TTCAGATATG ATTCGATGGA TAGCAAGCTT TATAGGTCTA TTCAGAATCT CCATGGAAAC TGAAGGCCCT GATATTTGTT CTGGTGTTTT CCTTGTGTTG TTCTACATCA TGCTATCCTA TGTAAGGTCA GACCTCGAGG ATATGGACTT TATCATGTCC ACGAGTGAAA ATAACTTGGC AGAGCGGCTT CTTCCTCCAA AATATTCATT TTTTATTCGA GAATCAAGGG CCGGTGTCAG GCACACCAAT GTTTTACTGA GGGGAGCTGT GTTTAAGACT TTCAGTATTA ATTTCTTCAC ATATGGTTTT CCGGTCTCTC TATTTGCTCT TTCGTTCTGG AGTTTTCACT TTGCGAGCTT GTGCGCTTTT GGCCTCCTTG CATATGTTGG TTACATTATT TATGCCTTCC CGTCATTGTT CCAGTTGCAC AGATTAAATG GCCTTCTTCT CGTATTTATA CTCTTATGGG CTGTCAGTAC GTACATATTC AATGTGGCAT TTTCTTTTCT GAACACTAAG GTTGGAAAGT TTGGTTTGGG GATGTTGGTC GCTTTGGGTA ATCTTGTAAA CAACTCTGTT TTTCTGTACC TGTCTGAAGA AAGCTCCAGA TCTTCCAATG AGAGATCTTA CGCTGAAGCT GATGAAGAAA CAAAGGTGTT GGTCGTCGCG ACCATTGCTT GGGGATTGCG GAAATGCTCA CGGGCTATTA TGCTTGCACT GATTTTTCTC ATTGCTATGA AACCTGGGTT TTTCCATGCC GTATATGTGA TATTCTTTCT TATGTATCTG TTGAGCCACA ACATCAACAG AAAGATACGC AAGTCCTTGA TTCTACTATG TGAAGTTCAT TTTGCTCTTC TCTACATTCT TGAGATTGAC CTGGTGTCGA ACTCCTTAAA GCAGGAAGGC TCTGTGAGCA GAGAAGTTCT ATTTCAGTTA GGTCTCCTTA GGTCTGAAAG CTCTTGGGAC TTCTTGGAGA TAGCCTTGCT AGCTTGTTTC TGTGCTATCC ATAATCATGG TTTCGAGGTG CTATTTTCAT TTTCAGCAAT TGTACGCCAT ACACCAAGCC CTCCAATTGG ATTTAGCATA TTGAAAGCTG GTCTCAACAA ATCAGTCCTC TTGTCTGTCT ATTCGTCTCC ATCTTCAAGT TATAGCCAGG ATAATACTAC TTACGGTACA ACACTTCCTT CTTGTCTTTG A 
Length1881
Protein Sequence
Protein Residue
Map Locationscaffold_4: 22082742.. 22087073
Download Sequence
A.thaliana
AGI-codeAT2G48060.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.79583 Ahg322444
5.47723 Ahg893776 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
12.3288 Ahg888078 Protein of unknown function (DUF3414)
24.0624 Ahg904230 varicose-related
42.4264 Ahg952051
46.744 Ahg488090 Heat shock protein DnaJ with tetratricopeptide repeat
52.0192 Ahg940804 Auxin-responsive GH3 family protein
66.3325 Ahg938452 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
69.0652 Ahg324761 Tetratricopeptide repeat (TPR)-like superfamily protein
72.5948 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression