Detail



ID : Ahg322957

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322957|fgenesh1_pm.C_scaffold_5000501
Sequence
ATGGCAAGAG TTCAGCTATT TTTATGCTTT ACCATTCTTT TTGCATCTGT GACTCTTCTG GACGTCGTTT CAGCTCATTT GAAGCTTAAG CCAACTTTGC CTCAGATCGA ACCTCCCCAG ACGGTGAAGG ATGTGGAACC TTACACCGTT AAAGTAGTGA TGGTCTTTGT GTCAGACCTC GAGAAAGAAT GTCCCAAGAC AAATAAATTT AAGGCCTTCT TTGAGAAACT CAGGGCATAC GCCAAGTATG TTTGCCCAAT AAAAAGAAAA GACCAAGTAG ATTACGACCG AGACATGAAG GCCAAGGCCG GAGGCCTCTT CCAGACCATA TCTTCTTTTG CCATTGGAAA GATAAAAAAG GAAATTCAAG AGGAGAAAAT GGAAGTCATT AATACCTTTA AGTTTATGAG ATTTCTTGCG GCTAAGATTA TGGGAAGCCG CAAAAAGGAT GAGAGCGAGG AATCAATGAA GCTAACAGCA GAACAACAAA AAGAAATCAA TGAAGGAATC TTAAGATGGG AAACAATTAT TGCTCGGATC ACAAACACAA TGGTAATGAG TACAAAAAAT TCTTCTTCTA GTGAAAACTC TACTACGGGG AAGGAAGCTT CAAGCGGCAG CAGCAAAAAA GGAGGCTCTT CCGAAGACAC TAAAGGTGCA AACACTAACA AGGGTGGAAG TCCATCCAGC AGCCCATCTG GTTCAAGCTC TTCCGCTAAA GGTGAAAGTG AGACTTCCTC TTCAAAAACT ACCGGTGGAA GCTCTACAAG CGCTACTCAA AAGGAAAGCT CCGCTAGTGG AAATGTTGGC GCTAGTCAGA GCAGTGGTGT AACAGTAGCA CAAGTTGAGG AAGAGACTTC CAAAGATGTC TCGACATTCA TAATGAACCT CGAAAAGAAA TGTCCGCAAA AAGAGGAATT TAAGGTCTTC TTCGAGCAAC TCAAGGGTAC AATGACTGCT CCCGCCAAAG AAAGAAAAGG TTTGTTTTCT AGGATTAAAT CTGCTGCTGG GAAACTATCT GGTGCGATGG CAGTTATGCG ATCTAGAATT GGAAGCAAAT CAGCAGAGGT TAAAAAGTCT ATGGAAACTT ACCAAGAACA AGTGATGAAA ACTCTCCAAG AGTTAGATAC CATTCACAGT CAAATTGTGA GTCAGAATAA AGGAAAGAAA GAAGGATCTT TGACATGCAC ACCAGCACAA CAAACTCAGA TTAAGCAGAC AATTACTAAG TGGGAACAAG TCACAACCCA ATTCGTGGAG ACCGCTATTC AGAGCGAGAC AAAGTCTTCG TCAACTACTT CATCTTCTGT CGGCAAGATG AACACAAACT GA 
Length1332
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4623195.. 4624713
Download Sequence
A.thaliana
AGI-codeAT3G28810.1
DescriptionProtein of unknown function (DUF1216)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg472106 Transducin/WD40 repeat-like superfamily protein
10.6771 Ahg325538 Ras-related small GTP-binding family protein
17.3205 Ahg930837 F-box and associated interaction domains-containing protein
22.1811 Ahg485183 Plant thionin family protein
25.4165 Ahg887488
26.9815 Ahg949066 Protein of unknown function (DUF784)
27.9285 Ahg922468 Terpenoid cyclases/Protein prenyltransferases superfamily protein
28.4956 Ahg323032 cytochrome P450, family 702, subfamily A, polypeptide 8
30.3974 Ahg337343
31.8904 Ahg495076
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression