Detail


ID : Ahg472106

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472106|fgenesh2_kg.1__2060__AT1G18830.1
Sequence
ATGGATTGCA TAAACAGTAT TGATAGATCC GCTTTCGTTG CCATTGCGCC GGAATCTCCG TTCATTGCGA CCGGAACAAT GGCCGGAGTA GTCATTGCAA AAGCTCTGAG CGGTTTAATC GACTCGCTTA GGGAAGTTAT GGATCTGGAT CTGATGGTCA CATCGCCGGT GGCCTCTTTG ACGGGAACAT CGGTTTATGG AATCCAATTC GAATTTTATG TTCGTGGTCT TGAATTTAAT GTCAAGTCCC CAAATAAACT TGCTTCTGGG ACTGATGATG GTACAGTTTG TATTTGGGAT TTAACAAATC CTTCAAAGCC TTGTCATTAT CTAAAGGGTA CTGGTTCTTA TATGCAAAGT GAAATCTCTT CTATATCATG GAATAGAGAG TTTCAACATG TTTTAGCATC TACCTCATAC AAAGGGACTA CTGTGATATG GGATGTGAAT AACGAGAAGG TTATAACAGA CTTCAAAAAT ACCGTTAGGT GCTCAATTTT GCAATGGGAT CCTGATAATT ATAATCAGAT AATGGTTGCA TCAGATGAAG ATAGTTCACC AAATGTGAAG CTTTTGGACA TAAGGTATCT ACAATCACCT GTTCGCACAT TTATTGGCCA CCAAAAAGGT GTGATTGCAA TGGAGTGGTG TCCAAGTGAC AGTTTGTATT TACTTACCTG GGCGAAAGAC AGCCGAACTA TTTGCTGGAA CACAAAGACA AGAAAGATTG CGGCTGAGTT ACCTACTGGC CAAAATTGGA ATTTTGATGT TCATTGGTAT CCAAAGATGC CTGGAGTTAT ATCAGCATCT TCAGTTGATG GGAAAATTAA CATCTATAAC CTTGAGGGTT GCAGCAGCTA TGGTACTGTG GAGAACAATT TAGATTCAGA ACCCCCAACA TCACTTCTTA TTCCATCATC TTGTTGCAGA TCTTTTAACA GCACCAAAAT GCTTATTTCG TTCAACAAAA ATCTCCCTGA GGCATCTGAG GTTTTTCTGC ATACCCTGGC CACAGAACAA AGTTTGGTGA ATCGAATTTC TAAATTTGAA GCTGCATTAG AAAATGGAGA GAAGACTTCA ATTAGGGAGA AGGAAACATG GGGATTGCTG AAAATCATGC TTGAAGAAGA TGGGAACGCA AAGACGAAGT TGCGTACCCA TCTTGGCTTT AGTTTACCTT CTGATGAAAA GGATCAAACT GTTAACGAGC CTCATGCTAC ATGTTCTTCT ACAAACGAGG AAGAAACTAA GAAAATGCCA GAACCAGAAG GAGAGAGCTC TTATCCAACA TTTGATGATG CTATCCAACG TTCATTGATT GTGGGAGATT ACAAGGGAGC AGTGGCTCAG TGTTTATCTG CAAATAAGAT GGCTGACGCT TTAGTGATTG CTCATGTTGG TGGTACAGAA TTGTGGGAGA GTACTCGCGA TATATATATA TATGAGGATG AGCAATGCAC CTTACATGAA GGTATATCAA CTTTACTTGA TATGTTTGTT GTCTCTGCAA TGATGAACAA TGATTTAATG ACCTTTGTTC ATACAAGACC ACCTAAATCC TGGAAAGAAA CACTTGCTCT CATCTGCACT TTTGCAGAAG GAGATGAATG GATAAGCCTC TGTGATGCTC TTACCTCAAA TTTGATGGAT CCTGGTTTTA CGTTGGCTGC AACTCTGTGT TACATTTGCT CAGGCAATGT CGACAAAACA GTAGACATTT GGTCAAGGAG CCTTGAAAAA GAAAGTGATG GGAAATCTTA TGCTGAGCGT GTTCAAGATG CGACTCTTGT CCTTGCTTTG GTAACTGGCA ACAAGAGATT CAGTGCGTCT CTACGTAAAC TCTTTGAGAG TTATGCTGAG ATATTGGCCA GTCAAGGACT TCTTGCAACC GCTATGAAGT TCTTAAAATT TCTTGAGTCT GGCGATTTCT CACCCGAACT TTCAATCTTG CATAATCAGA TTGCTCTGTA TGCGGAACCT GAAGCTGCTA ACACTTCTGC TTCAGAAAAC ACTCAGTCTA AAATCTCCAT GCCATATCAA AAGAAATATT TTCTTCCAGC TCCATTAAGC AATGCTCAGC CATCAAGAAC TACTTTTGTT CCTTTGAATC CTCCTAGAGA ACTAAAGAAC GCGGACCAGT ATCAGCAACC AACCATGGAT TCTTATTCGT TTAATCGATC CGCTGACCCA GCTTACAATG CATCACCCGG TCCTGGCTCA CATCGATCCA TTCCTTCACA AGTTGGTCCA TATATTAACT CCAAGATTCC CCAAACTGTT GCTCCACCAA TGGGACATAT GAATCCAACA CACCAGGTAG CAATGCAACC AGCACCTGTA GCTCCACCAC CAACTGTTCA GACCGCAGAT ACTTCCAATG TACCAGCCCA CCAGAAACCT ATTGTGTCTA CATTGACAAG GCTATTTAAA GAGACATTTG AACTATTAGG AGTAGAAGAT AACTCAAGAA AGCTAGGAGC TCTGTTTTTG AAACTAAATA GTGGAGACAT CTCAAAGAAC GCTGCTGGAA AACTCACTCA GCTCTGTCAA GCTCTGAACA AAAATAATCT TGGTGCAGCT TTACAAATAC AGGTGGCTAT GACAAACACC GAATGGTATG AGTGCAGTTT TTGGCTTCCA ACACTAAAGC AAATCATCAA GGGAAAGCAA AATGTTCAGT GA
Length2682
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7576279.. 7581215
Download Sequence
A.thaliana
AGI-codeAT1G18830.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg322957 Protein of unknown function (DUF1216)
21.8861 Ahg906489
38.6782 Ahg937866 HXXXD-type acyl-transferase family protein
52.0384 Ahg949069 transposable element gene
54.3323 Ahg925246 F-box associated ubiquitination effector family protein
63.9218 Ahg342312 ERD (early-responsive to dehydration stress) family protein
69.8284 Ahg900378
71.7077 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
73.4575 Ahg358442 structural maintenance of chromosomes 2
74.1418 Ahg495450 Protein of unknown function (DUF1278)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression