Detail



ID : Ahg323035

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323035|fgenesh1_pm.C_scaffold_5000579
Sequence
ATGATGCGAT TCACAATCAT AGTAATAGCT TTCCTTTTGA TTATTCAGTC CCTAGAGGAG GAACATGTCC TAGTCTATGC TCATGAAGGC GGAGAAGCTG GTCACAAGAG TCTTGACTAC CTTGGAGATC AAGATTCATT GACACTGCAT CCTAAAGAAT TTTACGATGC ACCGAGGAAA CTAAGGTCCG GGAGAACAAC AAGAGCCGAG AAGGAGCAAG TGACCGCGAT GAACAATGAT AATTGGAGCT TCAAGATTTC AGGTGCATCA AAGCATTTGA CACTTCGCCT ACCGAAACTT GAACCATCTA CTCCAACCAA TGATATGAAG AAACTGGCTC GGTTGTTACG TGATGATTAC CCGATCTATA GTAAGCCTCG ACGCAAGCCA CCGATCAATA ATCGAGCTCC AGACAAGTTT TAA 
Length423
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6170530.. 6171749
Download Sequence
A.thaliana
AGI-codeAT3G30350.2
Description
TAIR curator summaryEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Alias[GLV3][RGF4][GOLVEN 3][root meristem growth factor 4]
Gene coexpression
MR
MR Locus Description
2 Ahg894823 villin 3
2.44949 Ahg945916 F-box family protein with a domain of unknown function (DUF295)
4.89898 Ahg901240
6.9282 Ahg933767 Family of unknown function (DUF572)
10.583 Ahg951700 Concanavalin A-like lectin protein kinase family protein
12.6491 Ahg333271
12.6491 Ahg331721
18.9737 Ahg482164 Ubiquitin-like superfamily protein
20.199 Ahg326200 alpha/beta-Hydrolases superfamily protein
21.5639 Ahg931750
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression