Detail



ID : Ahg894823

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894823|Al_scaffold_0006_2819
Sequence
GAGGATCAAG AAACATCAGT TCATCTAGCG AGCACAATTA CATATTCATT GAAGGGAAGA GCACTGCACG TACCTTCTTT TGTTATTGCC CGTATATTTG GGGGTAAAGA ACCTCCACAA TTTGTTGCAG TTTTTCAACA TATGGTGGTC CTTAAGGGTG GTCTGAGTTC TGGTTACAAA AATAGAATGA CAGAGAAAGG TTCATCAGAC AAAACCTACA AGATGGAATC AATTGAAATG GAGGTCACAA TAATAGTTAG CCTGGGAATA CTGTCAGTCA AGAACGCAAA AGAGGGAACA GAGAGCTTAT CCTTTTGGTT TTCACTTGCT CTCCTTTTTC TTCAACAGAG GTTGAAGAGA TTCACAACTT TTGACCTCTT GACGGAAGAA ATGCATTTAC TCATGCTGAA ATTTATCGGG GTTGGTCAAT GTGTGGACCC AAAGGAAAAA CAAACTGCCT TTGAGATTAG CCAATTTTGT GCAGGATACA TATTTCTGGC TGGTTCCCTG AACGGCTTGT CCCCAAAAGT TCCATTATAC GAAATCACAG AGGGAAATGA GCCATGCTTT CTCACCACTT ATTTTTCATG GTATTCTACT AAAGCTACTG TGCAAGGGAA TTCCTTCCAG AAGAAGGCAG CATTATTACT TGGTACACAT CACGTTCTAG AGATACTACA AGCATGTGCT TTATGTTTCC TTGCTTTTAT GTTCAACAGT AGCAGGATCA GTCTAGAAGT GGTAATCAAG GACCAAGGCA AAGGGCTGCT GCCTTGA 
Length777
Protein Sequence
Protein Residue
Map Locationscaffold_6: 13326099.. 13332781
Download Sequence
A.thaliana
AGI-codeAT3G57410.1
Descriptionvillin 3
TAIR curator summaryEncodes a protein with high homology to animal villin. VLN3 is a Ca2+-regulated villin involved in actin filament bundling.
Alias[ATVLN3][VLN3][villin 3]
Gene coexpression
MR
MR Locus Description
2 Ahg323035
12.4097 Ahg924929 Expressed protein
29.189 Ahg946898 casein lytic proteinase B2
44.9889 Ahg489783 Outer membrane OMP85 family protein
48.7442 Ahg930671
60.2163 Ahg939886 Sec1/munc18-like (SM) proteins superfamily
62.2254 Ahg906357 Toll-Interleukin-Resistance (TIR) domain family protein
63.6239 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
68.6731 Ahg925156
69.1086 Ahg921942 Cysteine proteinases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression