Detail



ID : Ahg323593

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323593|fgenesh1_pm.C_scaffold_5001137
Sequence
ATGGAACCTT TTGGTACTAT TCCACCACCA CCACCACCAC CTCTAAGACT ACGACTAGGA CTACTATCAC AACCACCACC ACCACCACCA CTACCCCGTC TAGAATTACG ACGACAACCA CCACCACCAC CACCACCACG ACAACAACTA TTACGATTAC GAAAGCAACA TCCACTACTA CCCCAATCAT TGCCACTACG ACCACGAGCG ATTCCTTGGC TTACTGGGCA TGATGTCAAA AAAGGAAAAT CATACGACAA GTTGAGAGAA TACGTCGAAA ATGTCCGTAA GCAAAACGAA GAATCCGAAC TTGTCCTTTT AAACAAAAGT ATCAGCTATC AAGACCAAAA CTTGGAGAAC CACCAAGACA CTCGTTCTGA ACAATCTGGA ATGAACGAGG TGGTCGAAGG GAGCAGGAGC GGGAGTAAAC GACTTGAATG GGTGATCTCA ATGGAAGGCA AGCTCAAGGA AGCATATAGA GACGATGACA GAACTAGCTG GGGCAAGCTC TGTATATACA AAGTTCCACA TTACCTACAT GGAAACGACA AGAAGTCGTA TTTCCCTCAG ACTGTCTCGC TTGGTCCATA CCACCATGGG AGACAGCAAA CACAGTGCAT GGAGTGCCAC AAATGGCGTG CCGTCAGTAT GGTACTGAAA CGTACGAACC AAGGCATTGA AGTGTTTCTT GACGCCATGA CAAAGCTTGA AGAGAAGGCT CGTGCTTGCT ACGAAGGTCC CATTGTTTTG GACAGTAACG GGTTCACAGA AATGCTTGTT CTTGATGGCT GCTTTATTCT CGAGCTCCTC CAAGGAGTCG CTGAAGGATT CTTGAAACTC GGATATGATC ATAACGATCC AGTTTTCGCG GTTCGAGGAT CGATGCATTC GATACAACGT GACATGATAA TGCTGGAAAA TCAACTTCCT TTGTTCGTAC TCAACCGGTT ATTAGAGTTA CAGCCCGATT CACAGAACAA AACTGGTTTA GTGGAATTAG TGGTTCGGTT CTTCGTTCCA CTAATGCCAA CGGCCGAGAC GTTGGCCGAG AACTCGCCGC CAAGAGGCGT ATCCAATGGC GAATTGCACT GTCTTGATGT TTTCCATCGA AGTCTGCTCT TCCCAAGATC AGCCGGAAAG GCAAATTGCT CACGCGTGGC TGACAAACAT CTACAACGAG TGATACCAAC CGTGACCGAA CTAAGGGATG CCGGTTTTAA GTTCAAGCTA AATAAAACCG ACCGGTTTTG GGATATTAAA TTCAGCAACG GTTATCTAGA GATACCCAGT CTACTTATCC ATGATGGTAC CAAATCTCTC TTCTTGAATC TCATAGCTTT TGAGCAGTGT CATCTCGAGT CGAGCAATGA TATAACATCC TACATAATTT TTATGGACAA TTTAATAGAT TCTCCTGAAG ATATTAGTTA TTTGCATCAC CGTGGTATTA TTGAGCACTC TCTAGGAAGT AATTCTGAAG TTGCGGATAT GTTCAACCAG TTATGTCAGG AAGTGGTTTT CGACACCAAA GATATTTATC TATCCCAATT GTTGAGTGAG GTTCATCGTT GCTATGAACA AAACTACTCC AGGAAGTTGA ATTCTTTGAC AGCGACCTTG AAACACAAGT ACTTAGATAA CCCTTGGGCG TATTTGTCTT TCATTGCGGC AGTTATTCTT CTAATTCTTA CATTATCTCA AAGTTATTTT GCTGCTTATG CTTATTTTAA TCCATCCTCT TAG 
Length1743
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14173945.. 14175958
Download Sequence
A.thaliana
AGI-codeAT3G50180.1
DescriptionPlant protein of unknown function (DUF247)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg475383 GDSL-like Lipase/Acylhydrolase superfamily protein
6 Ahg326528
14.6969 Ahg937299 C2H2-type zinc finger family protein
16.9115 Ahg491207 3-ketoacyl-CoA synthase 17
18.1659 Ahg484821 glycosyl hydrolase 9A4
19.2873 Ahg477249 Cystathionine beta-synthase (CBS) family protein
21.2132 Ahg478708 Plant protein of unknown function (DUF868)
21.3542 Ahg479770 Pre-rRNA-processing protein TSR2, conserved region
21.9089 Ahg918906 Plant invertase/pectin methylesterase inhibitor superfamily protein
22.7156 Ahg493850 Receptor-like protein kinase-related family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression