Detail


ID : Ahg484821

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484821|fgenesh2_kg.5__813__AT3G43860.1
Sequence
AAAACAAGAA AAAACGAAAA GCATGCAATT GTTTTTCGTT TTTTGTTGAA ACAAAAAACA AACAGAACTT CACAAAAAAA TACAGAGAAA AAAAAAGATT CAGTTTCCTT TTCTTTGTTT CCACTTCTTA TATAAGAGTT GGCATTTTTA TTACAAACAT TACATTTGAA ATTATGGGTA ATTATGGGGA TAAAGGAAGA GGAAATGTTG TGATTAGGGC CATATTGTTG GGTCTCTATG GAATCATAAG CATTGTTTGT GTCAATGGTA CTAACATAAA CTACAAAGAT GCTTTAACCA AATCCCTCAT CTTCTTGGAG GCTCAAAGAT CAGGCAAACT CCCTCCTAAC AATAGGGTTC CATGGAGAGG TGATTCTGCT CTCGACGATG GCAAACTCGT AAATGTGGAT TTGTCGGGAG GGTACTATGA CGCAGGAGAC AATGTAAAGT ATGGTCTTCC AATGGCGTTT ACGATCACAA CGCTTGCTTG GTCTACCATT ACCTATGAGA AAGAACTCCG AGCCACGGGA GAGCTCGAAA ACGCTCGTGC TGCTATCCGT TGGGGTACAG ATTATTTCCT CAAATGTGCT TCTCGCAAGA ACCGCCTCTA TGTTCAGGTT GGTGATCCAA ACGCGGACCA CCAGTGCTGG GCGAGACCCG AGAACATGAA GACGCCAAGG ACGGTGTTGG AGATAAGCGA TAAAGTTCCA GGAACCGAGA TCGCTGCGGA AGCCGCCGCT GCATTCGCCG CTTCCTCCAT CGTTTTCCGC CATGTTGACC ACAAATATGC ACGCCGGCTT CTCAACAAAG CCAAATTGCT TTTCAAGCTA GCCAAAAGCC ACAAGGGTAC ATACGATGGA GAATGCCCGT TTTATTGTTC TAACTCCGGT TACAATGACG AGTTGATATG GGCGGCAACA TGGCTATACA AGGCGACAAG GAATGATTTG TACCTTAGCT ACCTCAAATT CGAAGCCATA AGCGCTTACG TCGCTGAATT CAGCTGGGAT CTCAAATACG CTGGTGCGCA GATCCTCATC ACTAAGTTGA TCTTCGAAGG CGCAAAAGGA CTTGATCTAT ACAAACAACA AGCAGATAGT TTTGTATGCT CTAATCTTCC CGGAAGTCCT TACCACCAAG TTTTTACTAC CCCAGGTGGT ATGATTCACT TGAGGGATGG AGCCAACAGT CAATATGTCA CCGCCACCGC CTTCTTGTTC TCAACCTACG CTGATATACT ACAGAAACAC AACCAAAAGA TCTCTTGCGG TAGCCACCAA TTCGATTCAA CACACCTCAT GGCTTTCGCT AAAAAACAGA TTGACTACAT ACTAGGGCAT AACCCACAAG GAAGATCGTA CATGGTTGGG TTCGGACCAA ACCCACCAAA GCAAGCCCAT CACAGAGGAG CCTCAGTGCC CATGCATGAA GCCAACGCGC CGTTAAGTTG CCCATTGAGC TTCGTGAAAT GGTACAACAA GAACGTACCT AACGCTAACG AGCTCACCGG AGCCATCTTG GGAGGACCTG ACCGTCAAGA CAAGTTCCAG GATCTCCGAT GGACTTCCGT GTACACAGAA CCTTGCACTT ACATCAACTC TATCGCCGTT GGTGTTCTCG CCAAGCTCGC TGCGGCTTAG AGCCTTTTGT ACCACATTCG AGACTACTTT GATGAAAGTA TTCTTCTAGG GTTTCCCTTA CCTACTAAAA TTGCATACAC CTGTGTGGCC ATGCAATGTA ATTCTATTTT TCATTTTCTT TTGCCTTTGT AGGTAGCTTT TTGGAATCAT GTTTTCTCCA AAATATAAAA TTGCATGGGT ATAATAATAA GCCCTAATGA TTTGAAACAA TAATTAAGTG AAATTAATGA ATAGCCGGAA GGATAAAACT CATTCCGTTT CACGTAGATT GTTGTTTTAA ACTA
Length1924
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9985531.. 9988269
Download Sequence
A.thaliana
AGI-codeAT3G43860.1
Descriptionglycosyl hydrolase 9A4
TAIR curator summary
Alias[AtGH9A4][GH9A4][glycosyl hydrolase 9A4]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg487574 Pectin lyase-like superfamily protein
5 Ahg949435
16.9115 Ahg898582
18.1659 Ahg323593 Plant protein of unknown function (DUF247)
20.6882 Ahg314297
34.7563 Ahg931305 F-box family protein
43.566 Ahg942130 Leucine-rich repeat (LRR) family protein
45.913 Ahg491590 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
52.9906 Ahg930327
52.9906 Ahg951747
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression