Detail



ID : Ahg323872

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323872|fgenesh1_pm.C_scaffold_5001416
Sequence
ATGAATCTTT CTCCGTTCAA GAGAGATATC GATGAGCTCA TAGACGAGTT TGTGGAGGGT GATTTGACAA CGTATGCTGA TATGAAGAGC GTGTGGCAAT CCCGAAAGTT TTCTTATATA TATGATGCTA GTCCTAACAG CAACTTAGCC TTTTTCATGC AGTCACTATA TGTTCATACC ATCGGTAACA TGGTTAGTAT TGATTCCTTT TCACGGAGAC TTGGAGGTCT CTACTGTCTC TATTGCCTTC ATGAGATCCA ACCCTTTAAA CCCAAGTTCA GAATTTATAT CTCACTTCAA GAGCTCGGGA AATTTAGGGA CCTTGTAGTT GAGGCAAAAG ATAAAAGTGT AGAGATAGCT GCTGCTGTGG CAAAACAAAT GCTTGATAAG AACATGTTTA TCTTTGGAGC TGTAGAGGAA GCTTGTGCAA CCAGGAAAGT TAATCAATTA ACAGAGCTAC AGAACGCACG TGTGCGGTTT GCCTATGATA GGTTAATCTC TGACACTAGT ATTGAGCAAT TTATTCATTT GGATATGGGT AAGGAAGTTA ATCTGAATTC CCTAGATAAA ATGTCTATAG AATATGCAGA GGCCAAGAAG CGTGCAATTG AAGGTGCAGG AGAGATAATG GAGATTGAGG ACATAAAGCA CATATCAGAA GAGAAAGAGT TGATGGGAGA AAGAATGGAG AAACTGAAAG AGGAATGGGA TTCACAAAGA CTTTCATTTT ATGAACAAAC CAAGCTTGAT GGTCTTACTA CGACACCGGA ACTGTTGAAA GATGTGGAAC ATGATGAAGA CGATGGGTTT GATGAGCTTG ATCGCTTACT TTCTCAAAGC TAG 
Length843
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15616005.. 15617796
Download Sequence
A.thaliana
AGI-codeAT3G53270.1
DescriptionSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
62.7774 Ahg338347 B-box zinc finger family protein
66.6783 Ahg476148 receptor serine/threonine kinase, putative
68.6294 Ahg475462 DNA-binding bromodomain-containing protein
69.7495 Ahg480584 Mechanosensitive ion channel family protein
78.2496 Ahg487788 reduced lateral root formation
78.3454 Ahg489172
85.188 Ahg334407
93.755 Ahg352549 RNI-like superfamily protein
93.8936 Ahg491290
93.9149 Ahg893739 TCP-1/cpn60 chaperonin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression