Detail



ID : Ahg487788

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487788|fgenesh2_kg.6__922__AT5G09680.2
Sequence
CAAATAGATC TCTCCCTCTT TCGTCGCTCT TTGTTTTTCT TCACTGGTCT TTGTTTCTCC TTCGATTCTC TGTCTGGAGC AGTCTCAGAT CCACCAGGTA TTCAATTTTC TTCTAGTACA TCTGATTTCC CTTGTTGGGT TGTTATTGTT TGCTTGATAT GGATTCATGA AATCAGAAAT TGCATATCTA TTTTTGTTAA ATTAAAGTTT CCAACTTTAA GAATTCCCAC CCAAGAATAC CTAAATCAGC ACCTTTAGAC TTTGTTTTGT CCCCAACTTT CGTCTTTGTT TAGATCTTCG CCTTCTTCTT CCTCAGAGTG CTTTACAGAG ACTTTAGGTT TTGTTTCTAA CTGACACGAA TTGTTCTGAA AACTGGGTGC AGATTATTGC TCGAAGCTCA AGATGGATTC TACTAGAGAT GATGATGATT TCACATTCTC AAAAGTTGCG CCACCAGATA GTGAAGCTGT TCTTGAGGCA AAAGCTCTTG CGTCAGATGT GGGTAGTATT ACCCTTAAAG ATGGATTAGA TCAACAAAGC AATGGTCTTA TTTGGAAAGA CAAGTCTCTT CCTCCAAAGG AAGAAACAAT AGGTTCTTTG TCTTTCAATG TGATTGATTC TTCATCTTTG AAAAAGCAGT CCAATGAATC ATCTGAGACT TTCAAAACTC CTGCTAGAAA GCCTATCACT CGTACCAAAG TTCCTTTTGA AAAAGGTTAT AGCCAAATGG ATTGGTTGAA ACTTACACGA ACACATCCCG ATCTTGCAGG CTTGAAGGGA GAGTCAAATA AGAGGCTTAT TCCAATGGAT GAAGTGAAGA AGCACCGATC AGGAGATTCA ATGTGGACTG TTTTGAAAGG TCGTGTGTAC AACATATCGC CTTATATGAA TTTTCATCCT GGAGGTGTCG ATATGCTGAT GAAAGCTGTG GGAAGAGACG GTACGCTCTT ATTCAACAAA TACCATGCTT GGGTCAATGT TGATATGTTA CTTGAGAAAT GCCTTGTTGG AGTTTTGGAT GTTACCAAAG TGAAGAAGCA AGAAGCCTAA TTGCTATTGC TAAAAGGATT CATAAGTCAA TAAGAATTAT TT 
Length1092
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G09680.1
Descriptionreduced lateral root formation
TAIR curator summaryEncodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol.
Alias[RLF][reduced lateral root formation]
Gene coexpression
MR
MR Locus Description
27.7308 Ahg952033 Cyclase family protein
34.5254 Ahg489570 long-chain acyl-CoA synthetase 7
58.0689 Ahg941373 Plant protein of unknown function (DUF946)
58.7878 Ahg493967 nodulin MtN21 /EamA-like transporter family protein
64.8074 Ahg477446 Bromodomain transcription factor
64.8614 Ahg483049 Alpha/beta hydrolase related protein
66.8207 Ahg495644 Protein kinase superfamily protein
78.2496 Ahg323872 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
81.111 Ahg929230
85.6037 Ahg324236 Transmembrane proteins 14C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression