Annotation |
Description | jgi|Araly1|487788|fgenesh2_kg.6__922__AT5G09680.2 |
Sequence |
CAAATAGATC TCTCCCTCTT TCGTCGCTCT TTGTTTTTCT TCACTGGTCT TTGTTTCTCC TTCGATTCTC TGTCTGGAGC AGTCTCAGAT CCACCAGGTA TTCAATTTTC TTCTAGTACA TCTGATTTCC CTTGTTGGGT TGTTATTGTT TGCTTGATAT GGATTCATGA AATCAGAAAT TGCATATCTA TTTTTGTTAA ATTAAAGTTT CCAACTTTAA GAATTCCCAC CCAAGAATAC CTAAATCAGC ACCTTTAGAC TTTGTTTTGT CCCCAACTTT CGTCTTTGTT TAGATCTTCG CCTTCTTCTT CCTCAGAGTG CTTTACAGAG ACTTTAGGTT TTGTTTCTAA CTGACACGAA TTGTTCTGAA AACTGGGTGC AGATTATTGC TCGAAGCTCA AGATGGATTC TACTAGAGAT GATGATGATT TCACATTCTC AAAAGTTGCG CCACCAGATA GTGAAGCTGT TCTTGAGGCA AAAGCTCTTG CGTCAGATGT GGGTAGTATT ACCCTTAAAG ATGGATTAGA TCAACAAAGC AATGGTCTTA TTTGGAAAGA CAAGTCTCTT CCTCCAAAGG AAGAAACAAT AGGTTCTTTG TCTTTCAATG TGATTGATTC TTCATCTTTG AAAAAGCAGT CCAATGAATC ATCTGAGACT TTCAAAACTC CTGCTAGAAA GCCTATCACT CGTACCAAAG TTCCTTTTGA AAAAGGTTAT AGCCAAATGG ATTGGTTGAA ACTTACACGA ACACATCCCG ATCTTGCAGG CTTGAAGGGA GAGTCAAATA AGAGGCTTAT TCCAATGGAT GAAGTGAAGA AGCACCGATC AGGAGATTCA ATGTGGACTG TTTTGAAAGG TCGTGTGTAC AACATATCGC CTTATATGAA TTTTCATCCT GGAGGTGTCG ATATGCTGAT GAAAGCTGTG GGAAGAGACG GTACGCTCTT ATTCAACAAA TACCATGCTT GGGTCAATGT TGATATGTTA CTTGAGAAAT GCCTTGTTGG AGTTTTGGAT GTTACCAAAG TGAAGAAGCA AGAAGCCTAA TTGCTATTGC TAAAAGGATT CATAAGTCAA TAAGAATTAT TT |
Length | 1092 |
Protein Sequence | |
Protein Residue | |
A.thaliana |
AGI-code | AT5G09680.1 |
Description | reduced lateral root formation |
TAIR curator summary | Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol. |
Alias | [RLF][reduced lateral root formation] |
Gene coexpression |
MR |
MR | Locus | Description |
27.7308 |
Ahg952033 | Cyclase family protein |
34.5254 |
Ahg489570 | long-chain acyl-CoA synthetase 7 |
58.0689 |
Ahg941373 | Plant protein of unknown function (DUF946) |
58.7878 |
Ahg493967 | nodulin MtN21 /EamA-like transporter family protein |
64.8074 |
Ahg477446 | Bromodomain transcription factor |
64.8614 |
Ahg483049 | Alpha/beta hydrolase related protein |
66.8207 |
Ahg495644 | Protein kinase superfamily protein |
78.2496 |
Ahg323872 | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein |
81.111 |
Ahg929230 | |
85.6037 |
Ahg324236 | Transmembrane proteins 14C |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
|