Detail



ID : Ahg949376

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949376|scaffold_801263.1
Sequence
CTTGTAGTCA ACCTTTGGAT ATGGAGAATA ATATGGTGGT GGTGGGGAGC TGTAAACATA TGGTGGTGGT GGGGACTTGT AGTCAACCTT TGGAGAAGGA GAGTAGTACG GTGGAGGTGG GGAGCTGTAG AGGTACGGTG GTGGTGGGGA CTTGTAGTCT ACCTTAGGAG AAGGAGAGTA GTATGGTGGT GGTGGGGAGT TGTAGACATA CGGTGGTGGT GGATATTTGT AGTCAGCTTT TGGAGAAGGA GAGTTGTATT GTGGTGGTGG GGAGCTGTAG ACGTAAGGTA GTGGTGGAGA CTTGTTTTCC ACCTTTGGAG AAGGAGAGTA GTATGGTGGA GGTGGGGAGT TGTAGACGTA TGATGGTGGT AGAGACTTGT AGTGAACTTT TAGAGAAGGA GAGAAGTACG GTGGTGGTGG GGAGCTGTAG ACGTATGGTA GTGGTGGAGA ATTGTAGTCA ACTTTTGGGG AATGAGAGTA GTACGGTGGA ACGTGAGGAA CTGTAAACAT ACGGTGGTGG TGGTGA 
Length526
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11868280.. 11868805
Download Sequence
A.thaliana
AGI-codeAT5G49080.1
Descriptiontransposable element gene
TAIR curator summary
Alias[EXT11][extensin 11]
Gene coexpression
MR
MR Locus Description
2 Ahg355525 transposable element gene
4 Ahg323992 hydroxyproline-rich glycoprotein
5.91608 Ahg931786 proline-rich extensin-like family protein
6 Ahg347221 hydroxyproline-rich glycoprotein
6.245 Ahg347223 Proline-rich extensin-like family protein
6.9282 Ahg912232 Proline-rich extensin-like family protein
8.77496 Ahg938381 Proline-rich extensin-like family protein
9.48683 Ahg916456 proline-rich extensin-like family protein
9.79796 Ahg940106 proline-rich extensin-like family protein
10.9545 Ahg921634 Proline-rich extensin-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression