| Annotation |
|---|
| Description | jgi|Araly1|325356|fgenesh1_pm.C_scaffold_6000576 |
| Sequence |
ATGGGATACA CAAATGTGTC CATTTTATTA GGCCTGTTGG TGGTCTTTGT TTCACCGGTG GTGTTCGCAG ATGATGTGAC ACCAATCCCA GAGGCCAAAC CCCAAGTGGC GCAGTGGTTC AAGGCCAACG TCGCTCCATT GGCTCAACGT AAAGGCTTAG ATCCAGCTCT CGTTGCTGCT GAGGCTGCTC CACGTATCAT CAACGTGAAT CCAAAGGGAG GTGAATTCAA AACACTAACG GACGCAATAA AGAGCGTTCC TGCAGGGAAC ACAAAGCGGG TGATCATAAA GATGGCTCCT GGGGAGTACA GAGAGAAGGT CACTATCGAC AGGAACAAAC CCTTCATTAC ATTGATGGGA CAACCCGGTG CCATGCCTGT TATCACCTAC GACGGTACCG CCGCCAAGTA TGGAACAGTT GATAGCGCCT CTCTCATTAT CTTATCCGAC TATTTCATGG CCGTTAACAT CGTTGTTAAG AATACTGCAC CGGCGCCAGA TGGTAAAACA AAGGGAGCAC AAGCCTTATC TATGAGAATC TCCGGAAACT TTGCTGCTTT TTACAACTGC AAATTCTACG GTTTCCAAGA CACAATCTGT GACGATACCG GAAACCATTT CTTCAAGGAT TGTTACGTCG AAGGAACATT CGATTTCATC TTCGGAAGTG GAACCTCTAT GTACTTGGGA ACACAATTGC ACGTGGTTGG AGATGGTATT AGAGTGATCG CAGCGCATGC AGGAAAGAGC GCAGAAGAGA AGAGCGGGTA CTCTTTCGTG CACTGCAAGG TGACTGGAAC CGGTGGTGGA ATCTATTTGG GAAGAGCATG GATGAGTCAC CCTAAGGTTG TCTATGCCTA CACCGAGATG ACCAGCGTTG TCAACCCCAC CGGATGGCAA GAAAACAAGA CTCCCGCACA TGACAGGACC GTGTTCTACG GAGAGTACAA GTGTTCAGGA CCAGGATCAC ACAAAGCCAA GAGAGTGCCA TTCACACAAG ACATTGACGA CAAAGAAGCT AACCGTTTCC TTTCCCTCGG CTACATCCAA GGATCCAAGT GGCTTCTCCC ACCACCAGCT TTGTAA |
| Length | 1086 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2783240.. 2784682 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G69940.1 |
| Description | Pectin lyase-like superfamily protein |
| TAIR curator summary | Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains' surrounding cells of the anthers. |
| Alias | [ATPPME1][PPME1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.63325 |
Ahg354612 | gibberellin 3-oxidase 3 |
| 9.05539 |
Ahg921700 | ENTH/VHS/GAT family protein |
| 12.1655 |
Ahg494865 | Pectin lyase-like superfamily protein |
| 15.3623 |
Ahg485277 | O-acyltransferase (WSD1-like) family protein |
| 17.3205 |
Ahg486726 | VANGUARD 1 homolog 2 |
| 17.6635 |
Ahg483920 | Signal transduction histidine kinase |
| 18.9737 |
Ahg487525 | nodulin MtN21 /EamA-like transporter family protein |
| 19.4422 |
Ahg351608 | Protein of Unknown Function (DUF239) |
| 20.6155 |
Ahg316771 | TRICHOME BIREFRINGENCE-LIKE 42 |
| 21.6333 |
Ahg315689 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|